Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
CLIC1O00299 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
CLIC1O00299 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CLIC1O00299 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLIC1O00299 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLIC1O00299 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CLIC1O00299 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.36■□□□□ 0.37
CLIC1O00299 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLIC1O00299 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLIC1O00299 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.36■□□□□ 0.37
CLIC1O00299 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLIC1O00299 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLIC1O00299 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLIC1O00299 AL096828.2-201ENST00000567259 1965 ntBASIC17.36■□□□□ 0.37
CLIC1O00299 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CLIC1O00299 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.36■□□□□ 0.37
CLIC1O00299 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLIC1O00299 KRT8P50-201ENST00000562022 1438 ntBASIC17.36■□□□□ 0.37
CLIC1O00299 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLIC1O00299 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLIC1O00299 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.36■□□□□ 0.37
CLIC1O00299 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLIC1O00299 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLIC1O00299 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLIC1O00299 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLIC1O00299 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CLIC1O00299 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLIC1O00299 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.35■□□□□ 0.37
CLIC1O00299 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLIC1O00299 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
CLIC1O00299 LINC00896-202ENST00000609602 2128 ntBASIC17.35■□□□□ 0.37
CLIC1O00299 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLIC1O00299 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLIC1O00299 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.35■□□□□ 0.37
CLIC1O00299 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CLIC1O00299 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.35■□□□□ 0.37
CLIC1O00299 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.35■□□□□ 0.37
CLIC1O00299 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.35■□□□□ 0.37
CLIC1O00299 CD177P1-201ENST00000606252 935 ntBASIC17.35■□□□□ 0.37
CLIC1O00299 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLIC1O00299 AL359736.2-201ENST00000621992 437 ntBASIC17.35■□□□□ 0.37
CLIC1O00299 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLIC1O00299 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
CLIC1O00299 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.35■□□□□ 0.37
CLIC1O00299 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLIC1O00299 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLIC1O00299 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLIC1O00299 FZD10-202ENST00000539839 3282 ntBASIC17.35■□□□□ 0.37
CLIC1O00299 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.35■□□□□ 0.37
CLIC1O00299 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CLIC1O00299 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLIC1O00299 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLIC1O00299 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLIC1O00299 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLIC1O00299 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CLIC1O00299 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CLIC1O00299 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLIC1O00299 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLIC1O00299 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLIC1O00299 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLIC1O00299 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.34■□□□□ 0.37
CLIC1O00299 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.34■□□□□ 0.37
CLIC1O00299 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CLIC1O00299 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.34■□□□□ 0.37
CLIC1O00299 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.34■□□□□ 0.37
CLIC1O00299 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CLIC1O00299 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CLIC1O00299 MFAP1P1-201ENST00000442257 1255 ntBASIC17.34■□□□□ 0.37
CLIC1O00299 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CLIC1O00299 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.34■□□□□ 0.37
CLIC1O00299 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLIC1O00299 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.34■□□□□ 0.37
CLIC1O00299 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.34■□□□□ 0.37
CLIC1O00299 SLC25A1P4-201ENST00000567977 778 ntBASIC17.34■□□□□ 0.37
CLIC1O00299 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLIC1O00299 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.34■□□□□ 0.37
CLIC1O00299 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.34■□□□□ 0.37
CLIC1O00299 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLIC1O00299 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.34■□□□□ 0.37
CLIC1O00299 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.34■□□□□ 0.37
CLIC1O00299 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLIC1O00299 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CLIC1O00299 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLIC1O00299 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CLIC1O00299 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLIC1O00299 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLIC1O00299 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
CLIC1O00299 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CLIC1O00299 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
CLIC1O00299 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLIC1O00299 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLIC1O00299 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CLIC1O00299 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLIC1O00299 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLIC1O00299 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLIC1O00299 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLIC1O00299 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLIC1O00299 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLIC1O00299 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLIC1O00299 AL135905.2-201ENST00000584934 1404 ntBASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms