Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
DFFAO00273 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
DFFAO00273 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
DFFAO00273 RCN1P1-201ENST00000400413 996 ntBASIC18.92■□□□□ 0.62
DFFAO00273 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.92■□□□□ 0.62
DFFAO00273 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.92■□□□□ 0.62
DFFAO00273 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
DFFAO00273 AC010240.3-201ENST00000607688 395 ntBASIC18.92■□□□□ 0.62
DFFAO00273 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.92■□□□□ 0.62
DFFAO00273 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
DFFAO00273 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
DFFAO00273 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
DFFAO00273 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
DFFAO00273 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
DFFAO00273 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DFFAO00273 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
DFFAO00273 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DFFAO00273 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
DFFAO00273 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DFFAO00273 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
DFFAO00273 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
DFFAO00273 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
DFFAO00273 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DFFAO00273 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.91■□□□□ 0.62
DFFAO00273 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.91■□□□□ 0.62
DFFAO00273 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.91■□□□□ 0.62
DFFAO00273 KRT18P21-201ENST00000515767 1272 ntBASIC18.91■□□□□ 0.62
DFFAO00273 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.91■□□□□ 0.62
DFFAO00273 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.91■□□□□ 0.62
DFFAO00273 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.91■□□□□ 0.62
DFFAO00273 RN7SL850P-201ENST00000579959 291 ntBASIC18.91■□□□□ 0.62
DFFAO00273 AC092865.7-201ENST00000641832 219 ntBASIC18.91■□□□□ 0.62
DFFAO00273 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.91■□□□□ 0.62
DFFAO00273 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
DFFAO00273 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
DFFAO00273 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DFFAO00273 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DFFAO00273 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DFFAO00273 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DFFAO00273 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
DFFAO00273 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.91■□□□□ 0.62
DFFAO00273 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DFFAO00273 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DFFAO00273 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
DFFAO00273 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
DFFAO00273 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DFFAO00273 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
DFFAO00273 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.9■□□□□ 0.62
DFFAO00273 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DFFAO00273 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DFFAO00273 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.9■□□□□ 0.62
DFFAO00273 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.9■□□□□ 0.62
DFFAO00273 AC117947.1-201ENST00000427448 529 ntBASIC18.9■□□□□ 0.62
DFFAO00273 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DFFAO00273 YBX1P2-201ENST00000489612 999 ntBASIC18.9■□□□□ 0.62
DFFAO00273 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
DFFAO00273 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.9■□□□□ 0.62
DFFAO00273 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.9■□□□□ 0.62
DFFAO00273 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.9■□□□□ 0.62
DFFAO00273 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.9■□□□□ 0.62
DFFAO00273 AL441883.1-201ENST00000566170 1045 ntBASIC18.9■□□□□ 0.62
DFFAO00273 AC011558.1-201ENST00000623459 338 ntBASIC18.9■□□□□ 0.62
DFFAO00273 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DFFAO00273 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
DFFAO00273 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.9■□□□□ 0.62
DFFAO00273 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
DFFAO00273 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.9■□□□□ 0.62
DFFAO00273 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.9■□□□□ 0.62
DFFAO00273 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DFFAO00273 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DFFAO00273 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DFFAO00273 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
DFFAO00273 NEFHP1-201ENST00000412845 2629 ntBASIC18.89■□□□□ 0.62
DFFAO00273 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.62
DFFAO00273 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
DFFAO00273 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
DFFAO00273 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DFFAO00273 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
DFFAO00273 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
DFFAO00273 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.89■□□□□ 0.61
DFFAO00273 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
DFFAO00273 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DFFAO00273 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DFFAO00273 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.89■□□□□ 0.61
DFFAO00273 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.89■□□□□ 0.61
DFFAO00273 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.89■□□□□ 0.61
DFFAO00273 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.89■□□□□ 0.61
DFFAO00273 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
DFFAO00273 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.89■□□□□ 0.61
DFFAO00273 AC006011.2-201ENST00000621313 1158 ntBASIC18.89■□□□□ 0.61
DFFAO00273 AL031432.5-201ENST00000641059 760 ntBASIC18.89■□□□□ 0.61
DFFAO00273 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DFFAO00273 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DFFAO00273 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DFFAO00273 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
DFFAO00273 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
DFFAO00273 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DFFAO00273 AC009102.3-201ENST00000623118 1491 ntBASIC18.89■□□□□ 0.61
DFFAO00273 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
DFFAO00273 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms