Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
C1QTNF3-AMACRE9PGA6 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
C1QTNF3-AMACRE9PGA6 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
C1QTNF3-AMACRE9PGA6 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
C1QTNF3-AMACRE9PGA6 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
C1QTNF3-AMACRE9PGA6 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.4■□□□□ 0.54
C1QTNF3-AMACRE9PGA6 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.4■□□□□ 0.54
C1QTNF3-AMACRE9PGA6 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
C1QTNF3-AMACRE9PGA6 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
C1QTNF3-AMACRE9PGA6 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
C1QTNF3-AMACRE9PGA6 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
C1QTNF3-AMACRE9PGA6 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
C1QTNF3-AMACRE9PGA6 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
C1QTNF3-AMACRE9PGA6 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
C1QTNF3-AMACRE9PGA6 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
C1QTNF3-AMACRE9PGA6 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.4■□□□□ 0.54
C1QTNF3-AMACRE9PGA6 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.4■□□□□ 0.54
C1QTNF3-AMACRE9PGA6 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.4■□□□□ 0.54
C1QTNF3-AMACRE9PGA6 VENTXP7-201ENST00000475503 772 ntBASIC18.4■□□□□ 0.54
C1QTNF3-AMACRE9PGA6 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
C1QTNF3-AMACRE9PGA6 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.4■□□□□ 0.54
C1QTNF3-AMACRE9PGA6 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
C1QTNF3-AMACRE9PGA6 AL592071.1-201ENST00000611956 408 ntBASIC18.4■□□□□ 0.54
C1QTNF3-AMACRE9PGA6 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
C1QTNF3-AMACRE9PGA6 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
C1QTNF3-AMACRE9PGA6 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
C1QTNF3-AMACRE9PGA6 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.4■□□□□ 0.54
C1QTNF3-AMACRE9PGA6 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
C1QTNF3-AMACRE9PGA6 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
C1QTNF3-AMACRE9PGA6 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
C1QTNF3-AMACRE9PGA6 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.39■□□□□ 0.54
C1QTNF3-AMACRE9PGA6 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
C1QTNF3-AMACRE9PGA6 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
C1QTNF3-AMACRE9PGA6 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.39■□□□□ 0.54
C1QTNF3-AMACRE9PGA6 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.39■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 AC113404.2-201ENST00000507884 177 ntBASIC18.39■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.39■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.39■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.39■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.39■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 AC124864.1-201ENST00000623408 392 ntBASIC18.39■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.39■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.39■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 SDHAP2-201ENST00000455183 2001 ntBASIC18.39■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.38■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 ANO7L1-203ENST00000602586 1720 ntBASIC18.38■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 NUS1P1-201ENST00000446295 882 ntBASIC18.38■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.38■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.38■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.38■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 AC012615.1-201ENST00000565797 1299 ntBASIC18.38■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 Z69720.1-201ENST00000601483 472 ntBASIC18.38■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.38■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 AC004263.2-201ENST00000617183 678 ntBASIC18.38■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.38■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.38■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.38■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 AL499627.1-201ENST00000569373 2188 ntBASIC18.37■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.37■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.37■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.37■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.37■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 AC104819.1-201ENST00000504587 486 ntBASIC18.37■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.37■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.37■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.37■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.37■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.37■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.37■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms