Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SPDYE4A6NLX3 AC022494.1-201ENST00000466044 728 ntBASIC20.74■□□□□ 0.91
SPDYE4A6NLX3 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SPDYE4A6NLX3 LINC01238-205ENST00000567549 1107 ntBASIC20.74■□□□□ 0.91
SPDYE4A6NLX3 AP001442.1-203ENST00000596385 876 ntTSL 5 BASIC20.74■□□□□ 0.91
SPDYE4A6NLX3 AC116351.2-201ENST00000606540 1585 ntBASIC20.74■□□□□ 0.91
SPDYE4A6NLX3 AC108359.1-201ENST00000616451 1211 ntBASIC20.74■□□□□ 0.91
SPDYE4A6NLX3 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.74■□□□□ 0.91
SPDYE4A6NLX3 AC073508.3-201ENST00000619697 1419 ntBASIC20.74■□□□□ 0.91
SPDYE4A6NLX3 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SPDYE4A6NLX3 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.74■□□□□ 0.91
SPDYE4A6NLX3 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SPDYE4A6NLX3 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SPDYE4A6NLX3 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SPDYE4A6NLX3 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SPDYE4A6NLX3 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
SPDYE4A6NLX3 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SPDYE4A6NLX3 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SPDYE4A6NLX3 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SPDYE4A6NLX3 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SPDYE4A6NLX3 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SPDYE4A6NLX3 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.73■□□□□ 0.91
SPDYE4A6NLX3 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SPDYE4A6NLX3 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
SPDYE4A6NLX3 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
SPDYE4A6NLX3 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SPDYE4A6NLX3 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SPDYE4A6NLX3 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SPDYE4A6NLX3 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SPDYE4A6NLX3 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SPDYE4A6NLX3 PSAT1P2-201ENST00000426107 972 ntBASIC20.73■□□□□ 0.91
SPDYE4A6NLX3 YY1P1-201ENST00000427625 668 ntBASIC20.73■□□□□ 0.91
SPDYE4A6NLX3 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SPDYE4A6NLX3 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC20.73■□□□□ 0.91
SPDYE4A6NLX3 AP005242.2-201ENST00000580065 1175 ntBASIC20.73■□□□□ 0.91
SPDYE4A6NLX3 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.73■□□□□ 0.91
SPDYE4A6NLX3 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SPDYE4A6NLX3 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
SPDYE4A6NLX3 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SPDYE4A6NLX3 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
SPDYE4A6NLX3 AC018553.1-201ENST00000616682 1458 ntBASIC20.73■□□□□ 0.91
SPDYE4A6NLX3 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.73■□□□□ 0.91
SPDYE4A6NLX3 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SPDYE4A6NLX3 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SPDYE4A6NLX3 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SPDYE4A6NLX3 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.72■□□□□ 0.91
SPDYE4A6NLX3 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPDYE4A6NLX3 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPDYE4A6NLX3 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SPDYE4A6NLX3 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPDYE4A6NLX3 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPDYE4A6NLX3 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
SPDYE4A6NLX3 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC20.72■□□□□ 0.91
SPDYE4A6NLX3 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPDYE4A6NLX3 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SPDYE4A6NLX3 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SPDYE4A6NLX3 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC20.72■□□□□ 0.91
SPDYE4A6NLX3 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SPDYE4A6NLX3 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SPDYE4A6NLX3 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SPDYE4A6NLX3 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.72■□□□□ 0.91
SPDYE4A6NLX3 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.72■□□□□ 0.91
SPDYE4A6NLX3 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC20.72■□□□□ 0.91
SPDYE4A6NLX3 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC20.72■□□□□ 0.91
SPDYE4A6NLX3 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SPDYE4A6NLX3 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SPDYE4A6NLX3 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SPDYE4A6NLX3 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPDYE4A6NLX3 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPDYE4A6NLX3 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SPDYE4A6NLX3 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.72■□□□□ 0.91
SPDYE4A6NLX3 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.71■□□□□ 0.91
SPDYE4A6NLX3 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SPDYE4A6NLX3 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SPDYE4A6NLX3 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
SPDYE4A6NLX3 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.71■□□□□ 0.91
SPDYE4A6NLX3 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SPDYE4A6NLX3 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SPDYE4A6NLX3 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SPDYE4A6NLX3 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SPDYE4A6NLX3 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SPDYE4A6NLX3 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SPDYE4A6NLX3 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC20.71■□□□□ 0.91
SPDYE4A6NLX3 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SPDYE4A6NLX3 AL357833.2-202ENST00000413757 372 ntTSL 3 BASIC20.71■□□□□ 0.91
SPDYE4A6NLX3 AK4P3-201ENST00000418260 669 ntBASIC20.71■□□□□ 0.91
SPDYE4A6NLX3 AC011506.1-201ENST00000474329 610 ntBASIC20.71■□□□□ 0.91
SPDYE4A6NLX3 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC20.71■□□□□ 0.91
SPDYE4A6NLX3 WWOX-216ENST00000569818 525 ntBASIC20.71■□□□□ 0.91
SPDYE4A6NLX3 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC20.71■□□□□ 0.91
SPDYE4A6NLX3 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SPDYE4A6NLX3 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SPDYE4A6NLX3 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SPDYE4A6NLX3 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.71■□□□□ 0.91
SPDYE4A6NLX3 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SPDYE4A6NLX3 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SPDYE4A6NLX3 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.71■□□□□ 0.91
SPDYE4A6NLX3 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SPDYE4A6NLX3 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SPDYE4A6NLX3 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms