Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
PRAMEF25A6NGN4 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEF25A6NGN4 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
PRAMEF25A6NGN4 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEF25A6NGN4 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEF25A6NGN4 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PRAMEF25A6NGN4 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
PRAMEF25A6NGN4 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEF25A6NGN4 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEF25A6NGN4 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF25A6NGN4 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF25A6NGN4 LTB4R2-202ENST00000528054 3092 ntBASIC17.24■□□□□ 0.35
PRAMEF25A6NGN4 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
PRAMEF25A6NGN4 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF25A6NGN4 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
PRAMEF25A6NGN4 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.24■□□□□ 0.35
PRAMEF25A6NGN4 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.24■□□□□ 0.35
PRAMEF25A6NGN4 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PRAMEF25A6NGN4 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF25A6NGN4 GPAT2P1-201ENST00000444924 1672 ntBASIC17.24■□□□□ 0.35
PRAMEF25A6NGN4 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF25A6NGN4 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF25A6NGN4 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.24■□□□□ 0.35
PRAMEF25A6NGN4 AL023284.2-201ENST00000405850 579 ntBASIC17.24■□□□□ 0.35
PRAMEF25A6NGN4 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.24■□□□□ 0.35
PRAMEF25A6NGN4 MCCD1P1-208ENST00000445732 328 ntBASIC17.24■□□□□ 0.35
PRAMEF25A6NGN4 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.24■□□□□ 0.35
PRAMEF25A6NGN4 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.24■□□□□ 0.35
PRAMEF25A6NGN4 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.24■□□□□ 0.35
PRAMEF25A6NGN4 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF25A6NGN4 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF25A6NGN4 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF25A6NGN4 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF25A6NGN4 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF25A6NGN4 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.24■□□□□ 0.35
PRAMEF25A6NGN4 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF25A6NGN4 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF25A6NGN4 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF25A6NGN4 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
PRAMEF25A6NGN4 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF25A6NGN4 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.24■□□□□ 0.35
PRAMEF25A6NGN4 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PRAMEF25A6NGN4 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
PRAMEF25A6NGN4 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
PRAMEF25A6NGN4 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF25A6NGN4 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.24■□□□□ 0.35
PRAMEF25A6NGN4 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF25A6NGN4 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF25A6NGN4 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF25A6NGN4 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF25A6NGN4 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF25A6NGN4 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF25A6NGN4 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF25A6NGN4 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF25A6NGN4 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF25A6NGN4 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF25A6NGN4 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.23■□□□□ 0.35
PRAMEF25A6NGN4 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF25A6NGN4 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF25A6NGN4 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.23■□□□□ 0.35
PRAMEF25A6NGN4 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PRAMEF25A6NGN4 RCC2P3-201ENST00000418112 1537 ntBASIC17.23■□□□□ 0.35
PRAMEF25A6NGN4 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF25A6NGN4 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF25A6NGN4 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
PRAMEF25A6NGN4 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.23■□□□□ 0.35
PRAMEF25A6NGN4 LIN28AP1-201ENST00000429574 405 ntBASIC17.23■□□□□ 0.35
PRAMEF25A6NGN4 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.23■□□□□ 0.35
PRAMEF25A6NGN4 ATP5G1P1-201ENST00000448724 379 ntBASIC17.23■□□□□ 0.35
PRAMEF25A6NGN4 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PRAMEF25A6NGN4 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF25A6NGN4 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.23■□□□□ 0.35
PRAMEF25A6NGN4 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PRAMEF25A6NGN4 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF25A6NGN4 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.23■□□□□ 0.35
PRAMEF25A6NGN4 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
PRAMEF25A6NGN4 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.23■□□□□ 0.35
PRAMEF25A6NGN4 AC008556.1-201ENST00000610908 2040 ntBASIC17.23■□□□□ 0.35
PRAMEF25A6NGN4 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF25A6NGN4 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF25A6NGN4 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.22■□□□□ 0.35
PRAMEF25A6NGN4 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF25A6NGN4 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF25A6NGN4 AC112777.1-201ENST00000540175 1423 ntBASIC17.22■□□□□ 0.35
PRAMEF25A6NGN4 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.22■□□□□ 0.35
PRAMEF25A6NGN4 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF25A6NGN4 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PRAMEF25A6NGN4 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF25A6NGN4 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF25A6NGN4 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
PRAMEF25A6NGN4 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF25A6NGN4 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.22■□□□□ 0.35
PRAMEF25A6NGN4 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF25A6NGN4 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF25A6NGN4 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF25A6NGN4 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF25A6NGN4 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
PRAMEF25A6NGN4 AL137013.1-201ENST00000432946 1228 ntBASIC17.22■□□□□ 0.35
PRAMEF25A6NGN4 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.22■□□□□ 0.35
PRAMEF25A6NGN4 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms