Protein–RNA interactions for Protein: A0A1B0GVL6

TMEM238L, HCG1800530, isoform CRA_b, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238LA0A1B0GVL6 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC12.9□□□□□ -0.34
TMEM238LA0A1B0GVL6 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM238LA0A1B0GVL6 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM238LA0A1B0GVL6 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM238LA0A1B0GVL6 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
TMEM238LA0A1B0GVL6 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM238LA0A1B0GVL6 SLC25A25-203ENST00000373068 3431 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM238LA0A1B0GVL6 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
TMEM238LA0A1B0GVL6 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM238LA0A1B0GVL6 AC011676.5-201ENST00000624864 2660 ntBASIC12.9□□□□□ -0.34
TMEM238LA0A1B0GVL6 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC12.9□□□□□ -0.34
TMEM238LA0A1B0GVL6 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
TMEM238LA0A1B0GVL6 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM238LA0A1B0GVL6 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM238LA0A1B0GVL6 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
TMEM238LA0A1B0GVL6 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
TMEM238LA0A1B0GVL6 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC12.9□□□□□ -0.35
TMEM238LA0A1B0GVL6 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
TMEM238LA0A1B0GVL6 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
TMEM238LA0A1B0GVL6 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
TMEM238LA0A1B0GVL6 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TMEM238LA0A1B0GVL6 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC12.89□□□□□ -0.35
TMEM238LA0A1B0GVL6 CICP4-201ENST00000447359 2812 ntBASIC12.89□□□□□ -0.35
TMEM238LA0A1B0GVL6 ENKUR-202ENST00000376363 1318 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TMEM238LA0A1B0GVL6 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TMEM238LA0A1B0GVL6 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TMEM238LA0A1B0GVL6 PXK-203ENST00000383715 1756 ntTSL 5 BASIC12.89□□□□□ -0.35
TMEM238LA0A1B0GVL6 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TMEM238LA0A1B0GVL6 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC12.89□□□□□ -0.35
TMEM238LA0A1B0GVL6 DNAL1-201ENST00000311089 2312 ntTSL 2 BASIC12.89□□□□□ -0.35
TMEM238LA0A1B0GVL6 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC12.89□□□□□ -0.35
TMEM238LA0A1B0GVL6 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
TMEM238LA0A1B0GVL6 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TMEM238LA0A1B0GVL6 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC12.89□□□□□ -0.35
TMEM238LA0A1B0GVL6 AL121761.2-201ENST00000598007 1648 ntBASIC12.89□□□□□ -0.35
TMEM238LA0A1B0GVL6 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC12.89□□□□□ -0.35
TMEM238LA0A1B0GVL6 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TMEM238LA0A1B0GVL6 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TMEM238LA0A1B0GVL6 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TMEM238LA0A1B0GVL6 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TMEM238LA0A1B0GVL6 AC008175.2-201ENST00000612840 297 ntBASIC12.89□□□□□ -0.35
TMEM238LA0A1B0GVL6 RARRES2P11-201ENST00000635158 484 ntBASIC12.89□□□□□ -0.35
TMEM238LA0A1B0GVL6 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TMEM238LA0A1B0GVL6 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TMEM238LA0A1B0GVL6 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TMEM238LA0A1B0GVL6 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC12.89□□□□□ -0.35
TMEM238LA0A1B0GVL6 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC12.89□□□□□ -0.35
TMEM238LA0A1B0GVL6 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
TMEM238LA0A1B0GVL6 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC12.89□□□□□ -0.35
TMEM238LA0A1B0GVL6 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TMEM238LA0A1B0GVL6 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
TMEM238LA0A1B0GVL6 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TMEM238LA0A1B0GVL6 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TMEM238LA0A1B0GVL6 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TMEM238LA0A1B0GVL6 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TMEM238LA0A1B0GVL6 ASL-203ENST00000380839 1765 ntTSL 5 BASIC12.89□□□□□ -0.35
TMEM238LA0A1B0GVL6 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TMEM238LA0A1B0GVL6 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
TMEM238LA0A1B0GVL6 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC12.88□□□□□ -0.35
TMEM238LA0A1B0GVL6 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
TMEM238LA0A1B0GVL6 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TMEM238LA0A1B0GVL6 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
TMEM238LA0A1B0GVL6 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TMEM238LA0A1B0GVL6 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TMEM238LA0A1B0GVL6 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TMEM238LA0A1B0GVL6 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
TMEM238LA0A1B0GVL6 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
TMEM238LA0A1B0GVL6 AC106886.4-201ENST00000623557 2502 ntBASIC12.88□□□□□ -0.35
TMEM238LA0A1B0GVL6 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
TMEM238LA0A1B0GVL6 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
TMEM238LA0A1B0GVL6 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
TMEM238LA0A1B0GVL6 POU5F1P4-201ENST00000413175 1085 ntBASIC12.88□□□□□ -0.35
TMEM238LA0A1B0GVL6 PTPA-214ENST00000423100 988 ntTSL 2 BASIC12.88□□□□□ -0.35
TMEM238LA0A1B0GVL6 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC12.88□□□□□ -0.35
TMEM238LA0A1B0GVL6 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC12.88□□□□□ -0.35
TMEM238LA0A1B0GVL6 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC12.88□□□□□ -0.35
TMEM238LA0A1B0GVL6 AC053503.5-201ENST00000601508 636 ntBASIC12.88□□□□□ -0.35
TMEM238LA0A1B0GVL6 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TMEM238LA0A1B0GVL6 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TMEM238LA0A1B0GVL6 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
TMEM238LA0A1B0GVL6 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
TMEM238LA0A1B0GVL6 AC040160.2-201ENST00000623816 1675 ntBASIC12.88□□□□□ -0.35
TMEM238LA0A1B0GVL6 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TMEM238LA0A1B0GVL6 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC12.88□□□□□ -0.35
TMEM238LA0A1B0GVL6 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC12.88□□□□□ -0.35
TMEM238LA0A1B0GVL6 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TMEM238LA0A1B0GVL6 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TMEM238LA0A1B0GVL6 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TMEM238LA0A1B0GVL6 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC12.88□□□□□ -0.35
TMEM238LA0A1B0GVL6 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TMEM238LA0A1B0GVL6 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC12.88□□□□□ -0.35
TMEM238LA0A1B0GVL6 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
TMEM238LA0A1B0GVL6 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TMEM238LA0A1B0GVL6 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
TMEM238LA0A1B0GVL6 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC12.88□□□□□ -0.35
TMEM238LA0A1B0GVL6 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TMEM238LA0A1B0GVL6 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
TMEM238LA0A1B0GVL6 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TMEM238LA0A1B0GVL6 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC12.88□□□□□ -0.35
TMEM238LA0A1B0GVL6 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms