Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNF103-CHMP3A0A140T963 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.75■□□□□ 0.43
RNF103-CHMP3A0A140T963 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.75■□□□□ 0.43
RNF103-CHMP3A0A140T963 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.75■□□□□ 0.43
RNF103-CHMP3A0A140T963 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF103-CHMP3A0A140T963 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RNF103-CHMP3A0A140T963 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF103-CHMP3A0A140T963 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF103-CHMP3A0A140T963 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF103-CHMP3A0A140T963 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF103-CHMP3A0A140T963 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF103-CHMP3A0A140T963 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF103-CHMP3A0A140T963 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF103-CHMP3A0A140T963 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF103-CHMP3A0A140T963 RPS2P4-201ENST00000476944 856 ntBASIC17.74■□□□□ 0.43
RNF103-CHMP3A0A140T963 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF103-CHMP3A0A140T963 AL353708.3-201ENST00000610272 989 ntBASIC17.74■□□□□ 0.43
RNF103-CHMP3A0A140T963 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.74■□□□□ 0.43
RNF103-CHMP3A0A140T963 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF103-CHMP3A0A140T963 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF103-CHMP3A0A140T963 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RNF103-CHMP3A0A140T963 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF103-CHMP3A0A140T963 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
RNF103-CHMP3A0A140T963 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF103-CHMP3A0A140T963 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF103-CHMP3A0A140T963 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.74■□□□□ 0.43
RNF103-CHMP3A0A140T963 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF103-CHMP3A0A140T963 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF103-CHMP3A0A140T963 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RNF103-CHMP3A0A140T963 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF103-CHMP3A0A140T963 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.74■□□□□ 0.43
RNF103-CHMP3A0A140T963 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
RNF103-CHMP3A0A140T963 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF103-CHMP3A0A140T963 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.73■□□□□ 0.43
RNF103-CHMP3A0A140T963 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RNF103-CHMP3A0A140T963 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF103-CHMP3A0A140T963 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF103-CHMP3A0A140T963 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
RNF103-CHMP3A0A140T963 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF103-CHMP3A0A140T963 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.73■□□□□ 0.43
RNF103-CHMP3A0A140T963 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.73■□□□□ 0.43
RNF103-CHMP3A0A140T963 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF103-CHMP3A0A140T963 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF103-CHMP3A0A140T963 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.73■□□□□ 0.43
RNF103-CHMP3A0A140T963 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF103-CHMP3A0A140T963 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
RNF103-CHMP3A0A140T963 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF103-CHMP3A0A140T963 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF103-CHMP3A0A140T963 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF103-CHMP3A0A140T963 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.73■□□□□ 0.43
RNF103-CHMP3A0A140T963 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.73■□□□□ 0.43
RNF103-CHMP3A0A140T963 AL353807.1-201ENST00000427475 662 ntBASIC17.73■□□□□ 0.43
RNF103-CHMP3A0A140T963 KSR1P1-201ENST00000446298 240 ntBASIC17.73■□□□□ 0.43
RNF103-CHMP3A0A140T963 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
RNF103-CHMP3A0A140T963 PRSS44-201ENST00000515154 1146 ntBASIC17.73■□□□□ 0.43
RNF103-CHMP3A0A140T963 AC126763.1-201ENST00000552015 2118 ntBASIC17.73■□□□□ 0.43
RNF103-CHMP3A0A140T963 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.73■□□□□ 0.43
RNF103-CHMP3A0A140T963 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.73■□□□□ 0.43
RNF103-CHMP3A0A140T963 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF103-CHMP3A0A140T963 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF103-CHMP3A0A140T963 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF103-CHMP3A0A140T963 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF103-CHMP3A0A140T963 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF103-CHMP3A0A140T963 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
RNF103-CHMP3A0A140T963 RCC2P6-201ENST00000526625 1557 ntBASIC17.73■□□□□ 0.43
RNF103-CHMP3A0A140T963 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
RNF103-CHMP3A0A140T963 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.73■□□□□ 0.43
RNF103-CHMP3A0A140T963 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF103-CHMP3A0A140T963 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF103-CHMP3A0A140T963 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF103-CHMP3A0A140T963 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF103-CHMP3A0A140T963 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF103-CHMP3A0A140T963 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF103-CHMP3A0A140T963 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF103-CHMP3A0A140T963 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.72■□□□□ 0.43
RNF103-CHMP3A0A140T963 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF103-CHMP3A0A140T963 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF103-CHMP3A0A140T963 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.72■□□□□ 0.43
RNF103-CHMP3A0A140T963 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.72■□□□□ 0.43
RNF103-CHMP3A0A140T963 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF103-CHMP3A0A140T963 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
RNF103-CHMP3A0A140T963 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF103-CHMP3A0A140T963 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF103-CHMP3A0A140T963 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF103-CHMP3A0A140T963 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF103-CHMP3A0A140T963 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF103-CHMP3A0A140T963 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF103-CHMP3A0A140T963 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF103-CHMP3A0A140T963 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
RNF103-CHMP3A0A140T963 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF103-CHMP3A0A140T963 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.72■□□□□ 0.43
RNF103-CHMP3A0A140T963 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF103-CHMP3A0A140T963 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.72■□□□□ 0.43
RNF103-CHMP3A0A140T963 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.72■□□□□ 0.43
RNF103-CHMP3A0A140T963 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF103-CHMP3A0A140T963 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.72■□□□□ 0.43
RNF103-CHMP3A0A140T963 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.72■□□□□ 0.43
RNF103-CHMP3A0A140T963 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
RNF103-CHMP3A0A140T963 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.72■□□□□ 0.43
RNF103-CHMP3A0A140T963 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms