Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
IGHV4-28A0A0C4DH34 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC13.29□□□□□ -0.28
IGHV4-28A0A0C4DH34 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
IGHV4-28A0A0C4DH34 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
IGHV4-28A0A0C4DH34 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
IGHV4-28A0A0C4DH34 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
IGHV4-28A0A0C4DH34 AL391807.1-203ENST00000604392 2365 ntBASIC13.29□□□□□ -0.28
IGHV4-28A0A0C4DH34 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
IGHV4-28A0A0C4DH34 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
IGHV4-28A0A0C4DH34 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
IGHV4-28A0A0C4DH34 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
IGHV4-28A0A0C4DH34 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
IGHV4-28A0A0C4DH34 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
IGHV4-28A0A0C4DH34 SPDYE13P-201ENST00000445314 798 ntBASIC13.29□□□□□ -0.28
IGHV4-28A0A0C4DH34 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC13.29□□□□□ -0.28
IGHV4-28A0A0C4DH34 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC13.29□□□□□ -0.28
IGHV4-28A0A0C4DH34 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC13.29□□□□□ -0.28
IGHV4-28A0A0C4DH34 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC13.29□□□□□ -0.28
IGHV4-28A0A0C4DH34 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC13.29□□□□□ -0.28
IGHV4-28A0A0C4DH34 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC13.29□□□□□ -0.28
IGHV4-28A0A0C4DH34 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC13.29□□□□□ -0.28
IGHV4-28A0A0C4DH34 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
IGHV4-28A0A0C4DH34 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
IGHV4-28A0A0C4DH34 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
IGHV4-28A0A0C4DH34 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC13.29□□□□□ -0.28
IGHV4-28A0A0C4DH34 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
IGHV4-28A0A0C4DH34 NFIC-211ENST00000641145 8399 ntBASIC13.29□□□□□ -0.28
IGHV4-28A0A0C4DH34 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC13.29□□□□□ -0.28
IGHV4-28A0A0C4DH34 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC13.29□□□□□ -0.28
IGHV4-28A0A0C4DH34 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
IGHV4-28A0A0C4DH34 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
IGHV4-28A0A0C4DH34 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC13.29□□□□□ -0.28
IGHV4-28A0A0C4DH34 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
IGHV4-28A0A0C4DH34 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
IGHV4-28A0A0C4DH34 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
IGHV4-28A0A0C4DH34 COBL-210ENST00000632460 1941 ntTSL 5 BASIC13.29□□□□□ -0.28
IGHV4-28A0A0C4DH34 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
IGHV4-28A0A0C4DH34 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
IGHV4-28A0A0C4DH34 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
IGHV4-28A0A0C4DH34 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
IGHV4-28A0A0C4DH34 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC13.29□□□□□ -0.28
IGHV4-28A0A0C4DH34 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
IGHV4-28A0A0C4DH34 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
IGHV4-28A0A0C4DH34 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IGHV4-28A0A0C4DH34 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IGHV4-28A0A0C4DH34 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
IGHV4-28A0A0C4DH34 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
IGHV4-28A0A0C4DH34 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IGHV4-28A0A0C4DH34 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
IGHV4-28A0A0C4DH34 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IGHV4-28A0A0C4DH34 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC13.28□□□□□ -0.28
IGHV4-28A0A0C4DH34 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC13.28□□□□□ -0.28
IGHV4-28A0A0C4DH34 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
IGHV4-28A0A0C4DH34 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
IGHV4-28A0A0C4DH34 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC13.28□□□□□ -0.28
IGHV4-28A0A0C4DH34 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
IGHV4-28A0A0C4DH34 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
IGHV4-28A0A0C4DH34 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IGHV4-28A0A0C4DH34 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IGHV4-28A0A0C4DH34 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
IGHV4-28A0A0C4DH34 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IGHV4-28A0A0C4DH34 FXN-203ENST00000396366 922 ntTSL 2 BASIC13.28□□□□□ -0.28
IGHV4-28A0A0C4DH34 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
IGHV4-28A0A0C4DH34 KRT18P41-201ENST00000518924 1277 ntBASIC13.28□□□□□ -0.28
IGHV4-28A0A0C4DH34 PTK2-216ENST00000519881 863 ntTSL 3 BASIC13.28□□□□□ -0.28
IGHV4-28A0A0C4DH34 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC13.28□□□□□ -0.28
IGHV4-28A0A0C4DH34 SPEG-225ENST00000617028 815 ntTSL 5 BASIC13.28□□□□□ -0.28
IGHV4-28A0A0C4DH34 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC13.28□□□□□ -0.28
IGHV4-28A0A0C4DH34 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
IGHV4-28A0A0C4DH34 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC13.28□□□□□ -0.28
IGHV4-28A0A0C4DH34 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
IGHV4-28A0A0C4DH34 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IGHV4-28A0A0C4DH34 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
IGHV4-28A0A0C4DH34 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
IGHV4-28A0A0C4DH34 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
IGHV4-28A0A0C4DH34 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IGHV4-28A0A0C4DH34 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IGHV4-28A0A0C4DH34 PBK-203ENST00000522944 1499 ntTSL 2 BASIC13.28□□□□□ -0.28
IGHV4-28A0A0C4DH34 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IGHV4-28A0A0C4DH34 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IGHV4-28A0A0C4DH34 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IGHV4-28A0A0C4DH34 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
IGHV4-28A0A0C4DH34 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IGHV4-28A0A0C4DH34 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IGHV4-28A0A0C4DH34 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IGHV4-28A0A0C4DH34 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC13.27□□□□□ -0.28
IGHV4-28A0A0C4DH34 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC13.27□□□□□ -0.28
IGHV4-28A0A0C4DH34 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
IGHV4-28A0A0C4DH34 RNF165-205ENST00000588679 2904 ntBASIC13.27□□□□□ -0.28
IGHV4-28A0A0C4DH34 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
IGHV4-28A0A0C4DH34 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
IGHV4-28A0A0C4DH34 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
IGHV4-28A0A0C4DH34 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
IGHV4-28A0A0C4DH34 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
IGHV4-28A0A0C4DH34 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC13.27□□□□□ -0.29
IGHV4-28A0A0C4DH34 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
IGHV4-28A0A0C4DH34 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
IGHV4-28A0A0C4DH34 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
IGHV4-28A0A0C4DH34 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC13.27□□□□□ -0.29
IGHV4-28A0A0C4DH34 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms