Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA6Q9Y5G7 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.74■□□□□ 0.43
PCDHGA6Q9Y5G7 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.74■□□□□ 0.43
PCDHGA6Q9Y5G7 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.74■□□□□ 0.43
PCDHGA6Q9Y5G7 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.74■□□□□ 0.43
PCDHGA6Q9Y5G7 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PCDHGA6Q9Y5G7 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.74■□□□□ 0.43
PCDHGA6Q9Y5G7 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA6Q9Y5G7 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA6Q9Y5G7 AL133373.2-201ENST00000623187 2828 ntBASIC17.74■□□□□ 0.43
PCDHGA6Q9Y5G7 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA6Q9Y5G7 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA6Q9Y5G7 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA6Q9Y5G7 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA6Q9Y5G7 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA6Q9Y5G7 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
PCDHGA6Q9Y5G7 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHGA6Q9Y5G7 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA6Q9Y5G7 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA6Q9Y5G7 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA6Q9Y5G7 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA6Q9Y5G7 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA6Q9Y5G7 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA6Q9Y5G7 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA6Q9Y5G7 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA6Q9Y5G7 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHGA6Q9Y5G7 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA6Q9Y5G7 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHGA6Q9Y5G7 SDHAP1-207ENST00000440850 2000 ntBASIC17.73■□□□□ 0.43
PCDHGA6Q9Y5G7 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHGA6Q9Y5G7 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA6Q9Y5G7 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA6Q9Y5G7 HBZP1-201ENST00000354915 429 ntBASIC17.73■□□□□ 0.43
PCDHGA6Q9Y5G7 ATP5G2P1-201ENST00000433580 426 ntBASIC17.73■□□□□ 0.43
PCDHGA6Q9Y5G7 RASA4DP-201ENST00000460726 1199 ntBASIC17.73■□□□□ 0.43
PCDHGA6Q9Y5G7 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.73■□□□□ 0.43
PCDHGA6Q9Y5G7 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PCDHGA6Q9Y5G7 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHGA6Q9Y5G7 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.73■□□□□ 0.43
PCDHGA6Q9Y5G7 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHGA6Q9Y5G7 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.73■□□□□ 0.43
PCDHGA6Q9Y5G7 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA6Q9Y5G7 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDHGA6Q9Y5G7 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA6Q9Y5G7 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA6Q9Y5G7 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA6Q9Y5G7 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PCDHGA6Q9Y5G7 AC093525.10-201ENST00000625130 1569 ntBASIC17.73■□□□□ 0.43
PCDHGA6Q9Y5G7 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDHGA6Q9Y5G7 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHGA6Q9Y5G7 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA6Q9Y5G7 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PCDHGA6Q9Y5G7 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDHGA6Q9Y5G7 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA6Q9Y5G7 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PCDHGA6Q9Y5G7 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA6Q9Y5G7 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHGA6Q9Y5G7 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA6Q9Y5G7 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
PCDHGA6Q9Y5G7 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA6Q9Y5G7 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA6Q9Y5G7 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA6Q9Y5G7 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHGA6Q9Y5G7 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA6Q9Y5G7 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA6Q9Y5G7 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA6Q9Y5G7 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.72■□□□□ 0.43
PCDHGA6Q9Y5G7 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
PCDHGA6Q9Y5G7 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA6Q9Y5G7 BICD1-207ENST00000551848 1962 ntBASIC17.72■□□□□ 0.43
PCDHGA6Q9Y5G7 FP475955.4-201ENST00000623131 1990 ntBASIC17.72■□□□□ 0.43
PCDHGA6Q9Y5G7 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHGA6Q9Y5G7 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA6Q9Y5G7 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
PCDHGA6Q9Y5G7 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA6Q9Y5G7 AL450487.1-201ENST00000426799 995 ntBASIC17.72■□□□□ 0.43
PCDHGA6Q9Y5G7 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA6Q9Y5G7 SPDYE13P-201ENST00000445314 798 ntBASIC17.72■□□□□ 0.43
PCDHGA6Q9Y5G7 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHGA6Q9Y5G7 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.72■□□□□ 0.43
PCDHGA6Q9Y5G7 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.72■□□□□ 0.43
PCDHGA6Q9Y5G7 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
PCDHGA6Q9Y5G7 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHGA6Q9Y5G7 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
PCDHGA6Q9Y5G7 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHGA6Q9Y5G7 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PCDHGA6Q9Y5G7 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.72■□□□□ 0.43
PCDHGA6Q9Y5G7 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA6Q9Y5G7 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA6Q9Y5G7 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA6Q9Y5G7 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA6Q9Y5G7 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PCDHGA6Q9Y5G7 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA6Q9Y5G7 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA6Q9Y5G7 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA6Q9Y5G7 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.71■□□□□ 0.43
PCDHGA6Q9Y5G7 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA6Q9Y5G7 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA6Q9Y5G7 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA6Q9Y5G7 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms