Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AL357033.4-201ENST00000617703 1807 ntBASIC18.04■□□□□ 0.48
PCDHB11Q9Y5F2 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
PCDHB11Q9Y5F2 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB11Q9Y5F2 WIZP1-201ENST00000531444 2299 ntBASIC18.03■□□□□ 0.48
PCDHB11Q9Y5F2 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
PCDHB11Q9Y5F2 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PCDHB11Q9Y5F2 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PCDHB11Q9Y5F2 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB11Q9Y5F2 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB11Q9Y5F2 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB11Q9Y5F2 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB11Q9Y5F2 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB11Q9Y5F2 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHB11Q9Y5F2 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB11Q9Y5F2 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
PCDHB11Q9Y5F2 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.03■□□□□ 0.48
PCDHB11Q9Y5F2 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB11Q9Y5F2 AC034232.1-201ENST00000506026 1064 ntBASIC18.03■□□□□ 0.48
PCDHB11Q9Y5F2 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
PCDHB11Q9Y5F2 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB11Q9Y5F2 AC079416.2-201ENST00000625035 1193 ntBASIC18.03■□□□□ 0.48
PCDHB11Q9Y5F2 AC104581.1-202ENST00000635932 2618 ntBASIC18.03■□□□□ 0.48
PCDHB11Q9Y5F2 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDHB11Q9Y5F2 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB11Q9Y5F2 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHB11Q9Y5F2 AC009113.1-201ENST00000570267 2443 ntBASIC18.03■□□□□ 0.48
PCDHB11Q9Y5F2 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB11Q9Y5F2 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB11Q9Y5F2 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB11Q9Y5F2 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB11Q9Y5F2 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB11Q9Y5F2 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB11Q9Y5F2 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHB11Q9Y5F2 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB11Q9Y5F2 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB11Q9Y5F2 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB11Q9Y5F2 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB11Q9Y5F2 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHB11Q9Y5F2 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB11Q9Y5F2 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
PCDHB11Q9Y5F2 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.02■□□□□ 0.48
PCDHB11Q9Y5F2 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB11Q9Y5F2 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB11Q9Y5F2 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.02■□□□□ 0.48
PCDHB11Q9Y5F2 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
PCDHB11Q9Y5F2 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB11Q9Y5F2 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB11Q9Y5F2 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB11Q9Y5F2 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.02■□□□□ 0.48
PCDHB11Q9Y5F2 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.48
PCDHB11Q9Y5F2 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB11Q9Y5F2 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB11Q9Y5F2 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB11Q9Y5F2 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB11Q9Y5F2 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.02■□□□□ 0.48
PCDHB11Q9Y5F2 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB11Q9Y5F2 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.02■□□□□ 0.48
PCDHB11Q9Y5F2 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
PCDHB11Q9Y5F2 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB11Q9Y5F2 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.02■□□□□ 0.48
PCDHB11Q9Y5F2 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.02■□□□□ 0.48
PCDHB11Q9Y5F2 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.02■□□□□ 0.48
PCDHB11Q9Y5F2 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.02■□□□□ 0.48
PCDHB11Q9Y5F2 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB11Q9Y5F2 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.02■□□□□ 0.48
PCDHB11Q9Y5F2 GCSHP2-201ENST00000560971 527 ntBASIC18.02■□□□□ 0.48
PCDHB11Q9Y5F2 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.02■□□□□ 0.48
PCDHB11Q9Y5F2 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.02■□□□□ 0.48
PCDHB11Q9Y5F2 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.02■□□□□ 0.48
PCDHB11Q9Y5F2 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHB11Q9Y5F2 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHB11Q9Y5F2 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.02■□□□□ 0.47
PCDHB11Q9Y5F2 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHB11Q9Y5F2 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHB11Q9Y5F2 AC034236.2-201ENST00000606662 1610 ntBASIC18.01■□□□□ 0.47
PCDHB11Q9Y5F2 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
PCDHB11Q9Y5F2 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
PCDHB11Q9Y5F2 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
PCDHB11Q9Y5F2 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB11Q9Y5F2 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDHB11Q9Y5F2 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB11Q9Y5F2 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB11Q9Y5F2 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
PCDHB11Q9Y5F2 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.01■□□□□ 0.47
PCDHB11Q9Y5F2 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB11Q9Y5F2 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
PCDHB11Q9Y5F2 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB11Q9Y5F2 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB11Q9Y5F2 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDHB11Q9Y5F2 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDHB11Q9Y5F2 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDHB11Q9Y5F2 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.01■□□□□ 0.47
PCDHB11Q9Y5F2 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
PCDHB11Q9Y5F2 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.01■□□□□ 0.47
PCDHB11Q9Y5F2 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB11Q9Y5F2 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.01■□□□□ 0.47
PCDHB11Q9Y5F2 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB11Q9Y5F2 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.01■□□□□ 0.47
PCDHB11Q9Y5F2 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB11Q9Y5F2 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms