Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRFN1Q9P244 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRFN1Q9P244 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRFN1Q9P244 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRFN1Q9P244 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRFN1Q9P244 AL450487.1-201ENST00000426799 995 ntBASIC16.88■□□□□ 0.29
LRFN1Q9P244 AP002383.4-201ENST00000442518 975 ntBASIC16.88■□□□□ 0.29
LRFN1Q9P244 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
LRFN1Q9P244 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.88■□□□□ 0.29
LRFN1Q9P244 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.88■□□□□ 0.29
LRFN1Q9P244 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.88■□□□□ 0.29
LRFN1Q9P244 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRFN1Q9P244 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRFN1Q9P244 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.88■□□□□ 0.29
LRFN1Q9P244 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRFN1Q9P244 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRFN1Q9P244 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRFN1Q9P244 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRFN1Q9P244 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.88■□□□□ 0.29
LRFN1Q9P244 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRFN1Q9P244 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
LRFN1Q9P244 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRFN1Q9P244 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRFN1Q9P244 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRFN1Q9P244 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
LRFN1Q9P244 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRFN1Q9P244 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRFN1Q9P244 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRFN1Q9P244 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRFN1Q9P244 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LRFN1Q9P244 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LRFN1Q9P244 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.87■□□□□ 0.29
LRFN1Q9P244 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.87■□□□□ 0.29
LRFN1Q9P244 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRFN1Q9P244 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
LRFN1Q9P244 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.87■□□□□ 0.29
LRFN1Q9P244 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRFN1Q9P244 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
LRFN1Q9P244 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRFN1Q9P244 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRFN1Q9P244 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRFN1Q9P244 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRFN1Q9P244 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.87■□□□□ 0.29
LRFN1Q9P244 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRFN1Q9P244 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRFN1Q9P244 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.87■□□□□ 0.29
LRFN1Q9P244 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
LRFN1Q9P244 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LRFN1Q9P244 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.87■□□□□ 0.29
LRFN1Q9P244 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.87■□□□□ 0.29
LRFN1Q9P244 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRFN1Q9P244 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.87■□□□□ 0.29
LRFN1Q9P244 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.87■□□□□ 0.29
LRFN1Q9P244 MIR3180-1-201ENST00000580374 94 ntBASIC16.87■□□□□ 0.29
LRFN1Q9P244 MIR3180-3-201ENST00000584616 94 ntBASIC16.87■□□□□ 0.29
LRFN1Q9P244 AL121894.2-201ENST00000602977 491 ntBASIC16.87■□□□□ 0.29
LRFN1Q9P244 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LRFN1Q9P244 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRFN1Q9P244 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LRFN1Q9P244 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRFN1Q9P244 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LRFN1Q9P244 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRFN1Q9P244 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.87■□□□□ 0.29
LRFN1Q9P244 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LRFN1Q9P244 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRFN1Q9P244 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.87■□□□□ 0.29
LRFN1Q9P244 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRFN1Q9P244 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
LRFN1Q9P244 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRFN1Q9P244 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.86■□□□□ 0.29
LRFN1Q9P244 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRFN1Q9P244 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC16.86■□□□□ 0.29
LRFN1Q9P244 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.86■□□□□ 0.29
LRFN1Q9P244 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRFN1Q9P244 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRFN1Q9P244 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRFN1Q9P244 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.86■□□□□ 0.29
LRFN1Q9P244 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LRFN1Q9P244 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.86■□□□□ 0.29
LRFN1Q9P244 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.86■□□□□ 0.29
LRFN1Q9P244 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.86■□□□□ 0.29
LRFN1Q9P244 PRELID1P1-202ENST00000567272 903 ntBASIC16.86■□□□□ 0.29
LRFN1Q9P244 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRFN1Q9P244 GPR32P1-201ENST00000601788 811 ntBASIC16.86■□□□□ 0.29
LRFN1Q9P244 AC012313.10-201ENST00000623509 926 ntBASIC16.86■□□□□ 0.29
LRFN1Q9P244 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.86■□□□□ 0.29
LRFN1Q9P244 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRFN1Q9P244 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC16.86■□□□□ 0.29
LRFN1Q9P244 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRFN1Q9P244 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LRFN1Q9P244 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRFN1Q9P244 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LRFN1Q9P244 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRFN1Q9P244 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRFN1Q9P244 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRFN1Q9P244 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.86■□□□□ 0.29
LRFN1Q9P244 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
LRFN1Q9P244 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
LRFN1Q9P244 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
LRFN1Q9P244 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms