Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SPHK1Q9NYA1 AP000550.4-202ENST00000639755 178 ntBASIC17.71■□□□□ 0.43
SPHK1Q9NYA1 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.71■□□□□ 0.43
SPHK1Q9NYA1 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SPHK1Q9NYA1 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SPHK1Q9NYA1 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SPHK1Q9NYA1 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.71■□□□□ 0.43
SPHK1Q9NYA1 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SPHK1Q9NYA1 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SPHK1Q9NYA1 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.71■□□□□ 0.43
SPHK1Q9NYA1 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SPHK1Q9NYA1 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SPHK1Q9NYA1 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.71■□□□□ 0.42
SPHK1Q9NYA1 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
SPHK1Q9NYA1 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.7■□□□□ 0.42
SPHK1Q9NYA1 AL162741.1-201ENST00000565563 1558 ntBASIC17.7■□□□□ 0.42
SPHK1Q9NYA1 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
SPHK1Q9NYA1 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SPHK1Q9NYA1 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SPHK1Q9NYA1 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SPHK1Q9NYA1 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SPHK1Q9NYA1 IER3-202ENST00000376377 1350 ntBASIC17.7■□□□□ 0.42
SPHK1Q9NYA1 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SPHK1Q9NYA1 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SPHK1Q9NYA1 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SPHK1Q9NYA1 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SPHK1Q9NYA1 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.7■□□□□ 0.42
SPHK1Q9NYA1 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SPHK1Q9NYA1 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SPHK1Q9NYA1 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.7■□□□□ 0.42
SPHK1Q9NYA1 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.7■□□□□ 0.42
SPHK1Q9NYA1 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.7■□□□□ 0.42
SPHK1Q9NYA1 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.7■□□□□ 0.42
SPHK1Q9NYA1 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
SPHK1Q9NYA1 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SPHK1Q9NYA1 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SPHK1Q9NYA1 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.7■□□□□ 0.42
SPHK1Q9NYA1 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.7■□□□□ 0.42
SPHK1Q9NYA1 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SPHK1Q9NYA1 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SPHK1Q9NYA1 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.7■□□□□ 0.42
SPHK1Q9NYA1 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SPHK1Q9NYA1 AL138781.2-201ENST00000617896 1843 ntBASIC17.7■□□□□ 0.42
SPHK1Q9NYA1 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SPHK1Q9NYA1 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SPHK1Q9NYA1 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPHK1Q9NYA1 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPHK1Q9NYA1 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.69■□□□□ 0.42
SPHK1Q9NYA1 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.69■□□□□ 0.42
SPHK1Q9NYA1 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.69■□□□□ 0.42
SPHK1Q9NYA1 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.69■□□□□ 0.42
SPHK1Q9NYA1 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.69■□□□□ 0.42
SPHK1Q9NYA1 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
SPHK1Q9NYA1 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SPHK1Q9NYA1 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPHK1Q9NYA1 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPHK1Q9NYA1 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPHK1Q9NYA1 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.69■□□□□ 0.42
SPHK1Q9NYA1 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPHK1Q9NYA1 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SPHK1Q9NYA1 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.69■□□□□ 0.42
SPHK1Q9NYA1 AC091076.1-201ENST00000610741 619 ntBASIC17.69■□□□□ 0.42
SPHK1Q9NYA1 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.69■□□□□ 0.42
SPHK1Q9NYA1 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPHK1Q9NYA1 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SPHK1Q9NYA1 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SPHK1Q9NYA1 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.69■□□□□ 0.42
SPHK1Q9NYA1 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SPHK1Q9NYA1 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.69■□□□□ 0.42
SPHK1Q9NYA1 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SPHK1Q9NYA1 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.68■□□□□ 0.42
SPHK1Q9NYA1 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPHK1Q9NYA1 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.68■□□□□ 0.42
SPHK1Q9NYA1 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SPHK1Q9NYA1 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPHK1Q9NYA1 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.68■□□□□ 0.42
SPHK1Q9NYA1 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPHK1Q9NYA1 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPHK1Q9NYA1 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPHK1Q9NYA1 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SPHK1Q9NYA1 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPHK1Q9NYA1 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPHK1Q9NYA1 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPHK1Q9NYA1 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPHK1Q9NYA1 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPHK1Q9NYA1 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.68■□□□□ 0.42
SPHK1Q9NYA1 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.68■□□□□ 0.42
SPHK1Q9NYA1 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.68■□□□□ 0.42
SPHK1Q9NYA1 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.68■□□□□ 0.42
SPHK1Q9NYA1 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.68■□□□□ 0.42
SPHK1Q9NYA1 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.68■□□□□ 0.42
SPHK1Q9NYA1 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.68■□□□□ 0.42
SPHK1Q9NYA1 RNF126P1-202ENST00000569893 925 ntBASIC17.68■□□□□ 0.42
SPHK1Q9NYA1 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.68■□□□□ 0.42
SPHK1Q9NYA1 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.68■□□□□ 0.42
SPHK1Q9NYA1 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.68■□□□□ 0.42
SPHK1Q9NYA1 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SPHK1Q9NYA1 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPHK1Q9NYA1 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.68■□□□□ 0.42
SPHK1Q9NYA1 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms