Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
PARPBPQ9NWS1 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PARPBPQ9NWS1 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PARPBPQ9NWS1 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.49■□□□□ 0.23
PARPBPQ9NWS1 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PARPBPQ9NWS1 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.49■□□□□ 0.23
PARPBPQ9NWS1 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.49■□□□□ 0.23
PARPBPQ9NWS1 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PARPBPQ9NWS1 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PARPBPQ9NWS1 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PARPBPQ9NWS1 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
PARPBPQ9NWS1 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PARPBPQ9NWS1 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.49■□□□□ 0.23
PARPBPQ9NWS1 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
PARPBPQ9NWS1 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PARPBPQ9NWS1 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PARPBPQ9NWS1 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PARPBPQ9NWS1 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PARPBPQ9NWS1 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PARPBPQ9NWS1 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.49■□□□□ 0.23
PARPBPQ9NWS1 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.49■□□□□ 0.23
PARPBPQ9NWS1 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.49■□□□□ 0.23
PARPBPQ9NWS1 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
PARPBPQ9NWS1 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.49■□□□□ 0.23
PARPBPQ9NWS1 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.49■□□□□ 0.23
PARPBPQ9NWS1 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PARPBPQ9NWS1 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.49■□□□□ 0.23
PARPBPQ9NWS1 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PARPBPQ9NWS1 AC004408.2-201ENST00000623613 2777 ntBASIC16.49■□□□□ 0.23
PARPBPQ9NWS1 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PARPBPQ9NWS1 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PARPBPQ9NWS1 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PARPBPQ9NWS1 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PARPBPQ9NWS1 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PARPBPQ9NWS1 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PARPBPQ9NWS1 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
PARPBPQ9NWS1 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PARPBPQ9NWS1 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.48■□□□□ 0.23
PARPBPQ9NWS1 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
PARPBPQ9NWS1 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PARPBPQ9NWS1 RNF152P1-201ENST00000397754 604 ntBASIC16.48■□□□□ 0.23
PARPBPQ9NWS1 AK4P3-201ENST00000418260 669 ntBASIC16.48■□□□□ 0.23
PARPBPQ9NWS1 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.48■□□□□ 0.23
PARPBPQ9NWS1 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PARPBPQ9NWS1 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.48■□□□□ 0.23
PARPBPQ9NWS1 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.48■□□□□ 0.23
PARPBPQ9NWS1 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.48■□□□□ 0.23
PARPBPQ9NWS1 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.48■□□□□ 0.23
PARPBPQ9NWS1 LINC01238-205ENST00000567549 1107 ntBASIC16.48■□□□□ 0.23
PARPBPQ9NWS1 RN7SL850P-201ENST00000579959 291 ntBASIC16.48■□□□□ 0.23
PARPBPQ9NWS1 MIR3180-4-201ENST00000582223 153 ntBASIC16.48■□□□□ 0.23
PARPBPQ9NWS1 AC139887.4-201ENST00000607877 719 ntBASIC16.48■□□□□ 0.23
PARPBPQ9NWS1 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.48■□□□□ 0.23
PARPBPQ9NWS1 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PARPBPQ9NWS1 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PARPBPQ9NWS1 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
PARPBPQ9NWS1 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PARPBPQ9NWS1 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PARPBPQ9NWS1 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
PARPBPQ9NWS1 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PARPBPQ9NWS1 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PARPBPQ9NWS1 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.48■□□□□ 0.23
PARPBPQ9NWS1 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PARPBPQ9NWS1 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.48■□□□□ 0.23
PARPBPQ9NWS1 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.48■□□□□ 0.23
PARPBPQ9NWS1 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PARPBPQ9NWS1 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PARPBPQ9NWS1 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PARPBPQ9NWS1 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PARPBPQ9NWS1 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PARPBPQ9NWS1 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
PARPBPQ9NWS1 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.47■□□□□ 0.23
PARPBPQ9NWS1 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
PARPBPQ9NWS1 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PARPBPQ9NWS1 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PARPBPQ9NWS1 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PARPBPQ9NWS1 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PARPBPQ9NWS1 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.47■□□□□ 0.23
PARPBPQ9NWS1 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
PARPBPQ9NWS1 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PARPBPQ9NWS1 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PARPBPQ9NWS1 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PARPBPQ9NWS1 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PARPBPQ9NWS1 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PARPBPQ9NWS1 YBX1P2-201ENST00000489612 999 ntBASIC16.47■□□□□ 0.23
PARPBPQ9NWS1 AC034232.1-201ENST00000506026 1064 ntBASIC16.47■□□□□ 0.23
PARPBPQ9NWS1 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PARPBPQ9NWS1 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.47■□□□□ 0.23
PARPBPQ9NWS1 AC104390.1-201ENST00000555663 520 ntBASIC16.47■□□□□ 0.23
PARPBPQ9NWS1 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.47■□□□□ 0.23
PARPBPQ9NWS1 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PARPBPQ9NWS1 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.47■□□□□ 0.23
PARPBPQ9NWS1 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.47■□□□□ 0.23
PARPBPQ9NWS1 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
PARPBPQ9NWS1 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PARPBPQ9NWS1 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PARPBPQ9NWS1 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PARPBPQ9NWS1 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PARPBPQ9NWS1 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PARPBPQ9NWS1 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms