Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 ME2-218ENST00000640965 2476 ntTSL 5 BASIC26.28■■□□□ 1.8
SLC52A1Q9NWF4 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SLC52A1Q9NWF4 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC26.28■■□□□ 1.8
SLC52A1Q9NWF4 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC26.28■■□□□ 1.8
SLC52A1Q9NWF4 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SLC52A1Q9NWF4 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC26.28■■□□□ 1.8
SLC52A1Q9NWF4 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC26.28■■□□□ 1.8
SLC52A1Q9NWF4 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC26.28■■□□□ 1.8
SLC52A1Q9NWF4 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC26.28■■□□□ 1.8
SLC52A1Q9NWF4 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC26.28■■□□□ 1.8
SLC52A1Q9NWF4 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC26.28■■□□□ 1.8
SLC52A1Q9NWF4 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC26.28■■□□□ 1.8
SLC52A1Q9NWF4 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC26.28■■□□□ 1.8
SLC52A1Q9NWF4 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SLC52A1Q9NWF4 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SLC52A1Q9NWF4 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SLC52A1Q9NWF4 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
SLC52A1Q9NWF4 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC26.28■■□□□ 1.8
SLC52A1Q9NWF4 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC26.28■■□□□ 1.8
SLC52A1Q9NWF4 MYLKP1-201ENST00000509077 1580 ntBASIC26.28■■□□□ 1.8
SLC52A1Q9NWF4 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SLC52A1Q9NWF4 AL356309.3-201ENST00000624132 1934 ntBASIC26.27■■□□□ 1.8
SLC52A1Q9NWF4 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC26.27■■□□□ 1.8
SLC52A1Q9NWF4 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
SLC52A1Q9NWF4 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
SLC52A1Q9NWF4 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SLC52A1Q9NWF4 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SLC52A1Q9NWF4 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SLC52A1Q9NWF4 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
SLC52A1Q9NWF4 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC26.27■■□□□ 1.8
SLC52A1Q9NWF4 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SLC52A1Q9NWF4 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC26.27■■□□□ 1.8
SLC52A1Q9NWF4 IMP4-203ENST00000409935 958 ntTSL 5 BASIC26.27■■□□□ 1.8
SLC52A1Q9NWF4 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC26.27■■□□□ 1.8
SLC52A1Q9NWF4 AC140113.2-201ENST00000604370 208 ntBASIC26.27■■□□□ 1.8
SLC52A1Q9NWF4 AC025062.2-201ENST00000605477 670 ntBASIC26.27■■□□□ 1.8
SLC52A1Q9NWF4 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
SLC52A1Q9NWF4 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SLC52A1Q9NWF4 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
SLC52A1Q9NWF4 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC26.27■■□□□ 1.8
SLC52A1Q9NWF4 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SLC52A1Q9NWF4 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SLC52A1Q9NWF4 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SLC52A1Q9NWF4 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC26.26■■□□□ 1.79
SLC52A1Q9NWF4 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SLC52A1Q9NWF4 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SLC52A1Q9NWF4 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
SLC52A1Q9NWF4 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SLC52A1Q9NWF4 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
SLC52A1Q9NWF4 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC26.26■■□□□ 1.79
SLC52A1Q9NWF4 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SLC52A1Q9NWF4 CTNS-203ENST00000399306 803 ntTSL 3 BASIC26.26■■□□□ 1.79
SLC52A1Q9NWF4 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SLC52A1Q9NWF4 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC26.26■■□□□ 1.79
SLC52A1Q9NWF4 AC098831.1-202ENST00000438821 336 ntBASIC26.26■■□□□ 1.79
SLC52A1Q9NWF4 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC26.26■■□□□ 1.79
SLC52A1Q9NWF4 AC012640.2-201ENST00000561606 901 ntBASIC26.26■■□□□ 1.79
SLC52A1Q9NWF4 AL139288.1-201ENST00000623748 933 ntBASIC26.26■■□□□ 1.79
SLC52A1Q9NWF4 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
SLC52A1Q9NWF4 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
SLC52A1Q9NWF4 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC26.26■■□□□ 1.79
SLC52A1Q9NWF4 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SLC52A1Q9NWF4 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SLC52A1Q9NWF4 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC26.25■■□□□ 1.79
SLC52A1Q9NWF4 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC26.25■■□□□ 1.79
SLC52A1Q9NWF4 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SLC52A1Q9NWF4 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SLC52A1Q9NWF4 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SLC52A1Q9NWF4 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SLC52A1Q9NWF4 RAB17-203ENST00000409576 466 ntTSL 3 BASIC26.25■■□□□ 1.79
SLC52A1Q9NWF4 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC26.25■■□□□ 1.79
SLC52A1Q9NWF4 KRT18P65-201ENST00000439811 1286 ntBASIC26.25■■□□□ 1.79
SLC52A1Q9NWF4 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC26.25■■□□□ 1.79
SLC52A1Q9NWF4 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
SLC52A1Q9NWF4 OR7E14P-202ENST00000530490 1290 ntBASIC26.25■■□□□ 1.79
SLC52A1Q9NWF4 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC26.25■■□□□ 1.79
SLC52A1Q9NWF4 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC26.25■■□□□ 1.79
SLC52A1Q9NWF4 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC26.25■■□□□ 1.79
SLC52A1Q9NWF4 AL356488.2-201ENST00000602755 427 ntBASIC26.25■■□□□ 1.79
SLC52A1Q9NWF4 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
SLC52A1Q9NWF4 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SLC52A1Q9NWF4 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SLC52A1Q9NWF4 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SLC52A1Q9NWF4 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SLC52A1Q9NWF4 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
SLC52A1Q9NWF4 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC26.24■■□□□ 1.79
SLC52A1Q9NWF4 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC26.24■■□□□ 1.79
SLC52A1Q9NWF4 NMU-202ENST00000505262 693 ntTSL 3 BASIC26.24■■□□□ 1.79
SLC52A1Q9NWF4 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC26.24■■□□□ 1.79
SLC52A1Q9NWF4 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC26.24■■□□□ 1.79
SLC52A1Q9NWF4 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
SLC52A1Q9NWF4 Z83851.2-201ENST00000609564 659 ntBASIC26.24■■□□□ 1.79
SLC52A1Q9NWF4 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SLC52A1Q9NWF4 AC055717.3-201ENST00000622967 595 ntBASIC26.24■■□□□ 1.79
SLC52A1Q9NWF4 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
SLC52A1Q9NWF4 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SLC52A1Q9NWF4 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SLC52A1Q9NWF4 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC26.24■■□□□ 1.79
SLC52A1Q9NWF4 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SLC52A1Q9NWF4 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC26.23■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms