Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PDLIM7Q9NR12 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PDLIM7Q9NR12 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.57■□□□□ 0.88
PDLIM7Q9NR12 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.57■□□□□ 0.88
PDLIM7Q9NR12 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PDLIM7Q9NR12 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.57■□□□□ 0.88
PDLIM7Q9NR12 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.57■□□□□ 0.88
PDLIM7Q9NR12 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
PDLIM7Q9NR12 FAM197Y8-203ENST00000450145 560 ntBASIC20.57■□□□□ 0.88
PDLIM7Q9NR12 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC20.57■□□□□ 0.88
PDLIM7Q9NR12 POLD2P1-201ENST00000511220 997 ntBASIC20.57■□□□□ 0.88
PDLIM7Q9NR12 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PDLIM7Q9NR12 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.57■□□□□ 0.88
PDLIM7Q9NR12 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.57■□□□□ 0.88
PDLIM7Q9NR12 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
PDLIM7Q9NR12 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.57■□□□□ 0.88
PDLIM7Q9NR12 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PDLIM7Q9NR12 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PDLIM7Q9NR12 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.57■□□□□ 0.88
PDLIM7Q9NR12 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PDLIM7Q9NR12 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.57■□□□□ 0.88
PDLIM7Q9NR12 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.57■□□□□ 0.88
PDLIM7Q9NR12 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.57■□□□□ 0.88
PDLIM7Q9NR12 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDLIM7Q9NR12 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC20.56■□□□□ 0.88
PDLIM7Q9NR12 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDLIM7Q9NR12 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDLIM7Q9NR12 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.56■□□□□ 0.88
PDLIM7Q9NR12 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDLIM7Q9NR12 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PDLIM7Q9NR12 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDLIM7Q9NR12 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDLIM7Q9NR12 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDLIM7Q9NR12 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.56■□□□□ 0.88
PDLIM7Q9NR12 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PDLIM7Q9NR12 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDLIM7Q9NR12 FAM220CP-201ENST00000395253 831 ntBASIC20.56■□□□□ 0.88
PDLIM7Q9NR12 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDLIM7Q9NR12 AL031284.1-201ENST00000419297 478 ntBASIC20.56■□□□□ 0.88
PDLIM7Q9NR12 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.56■□□□□ 0.88
PDLIM7Q9NR12 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.56■□□□□ 0.88
PDLIM7Q9NR12 MIR3180-4-201ENST00000582223 153 ntBASIC20.56■□□□□ 0.88
PDLIM7Q9NR12 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20.56■□□□□ 0.88
PDLIM7Q9NR12 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC20.56■□□□□ 0.88
PDLIM7Q9NR12 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.56■□□□□ 0.88
PDLIM7Q9NR12 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDLIM7Q9NR12 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDLIM7Q9NR12 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDLIM7Q9NR12 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PDLIM7Q9NR12 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PDLIM7Q9NR12 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.56■□□□□ 0.88
PDLIM7Q9NR12 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.56■□□□□ 0.88
PDLIM7Q9NR12 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.56■□□□□ 0.88
PDLIM7Q9NR12 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.56■□□□□ 0.88
PDLIM7Q9NR12 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
PDLIM7Q9NR12 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.56■□□□□ 0.88
PDLIM7Q9NR12 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PDLIM7Q9NR12 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PDLIM7Q9NR12 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
PDLIM7Q9NR12 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDLIM7Q9NR12 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.55■□□□□ 0.88
PDLIM7Q9NR12 CROCCP3-202ENST00000420820 1947 ntBASIC20.55■□□□□ 0.88
PDLIM7Q9NR12 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PDLIM7Q9NR12 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PDLIM7Q9NR12 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
PDLIM7Q9NR12 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDLIM7Q9NR12 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.55■□□□□ 0.88
PDLIM7Q9NR12 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.55■□□□□ 0.88
PDLIM7Q9NR12 KRT18P67-201ENST00000432816 1264 ntBASIC20.55■□□□□ 0.88
PDLIM7Q9NR12 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.55■□□□□ 0.88
PDLIM7Q9NR12 RN7SL606P-201ENST00000472779 293 ntBASIC20.55■□□□□ 0.88
PDLIM7Q9NR12 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.55■□□□□ 0.88
PDLIM7Q9NR12 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.55■□□□□ 0.88
PDLIM7Q9NR12 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDLIM7Q9NR12 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.55■□□□□ 0.88
PDLIM7Q9NR12 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.55■□□□□ 0.88
PDLIM7Q9NR12 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PDLIM7Q9NR12 AC124864.1-201ENST00000623408 392 ntBASIC20.55■□□□□ 0.88
PDLIM7Q9NR12 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PDLIM7Q9NR12 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
PDLIM7Q9NR12 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PDLIM7Q9NR12 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDLIM7Q9NR12 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDLIM7Q9NR12 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDLIM7Q9NR12 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDLIM7Q9NR12 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDLIM7Q9NR12 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PDLIM7Q9NR12 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDLIM7Q9NR12 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDLIM7Q9NR12 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDLIM7Q9NR12 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PDLIM7Q9NR12 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDLIM7Q9NR12 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.54■□□□□ 0.88
PDLIM7Q9NR12 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDLIM7Q9NR12 IGHGP-201ENST00000390555 1178 ntBASIC20.54■□□□□ 0.88
PDLIM7Q9NR12 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDLIM7Q9NR12 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC20.54■□□□□ 0.88
PDLIM7Q9NR12 AC091607.1-201ENST00000490318 1060 ntBASIC20.54■□□□□ 0.88
PDLIM7Q9NR12 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC20.54■□□□□ 0.88
PDLIM7Q9NR12 AC106730.1-201ENST00000566722 1090 ntBASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms