Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HINT3Q9NQE9 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.66■□□□□ 0.26
HINT3Q9NQE9 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.66■□□□□ 0.26
HINT3Q9NQE9 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.66■□□□□ 0.26
HINT3Q9NQE9 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HINT3Q9NQE9 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HINT3Q9NQE9 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HINT3Q9NQE9 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HINT3Q9NQE9 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.66■□□□□ 0.26
HINT3Q9NQE9 AC004951.3-201ENST00000418645 1148 ntBASIC16.66■□□□□ 0.26
HINT3Q9NQE9 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.66■□□□□ 0.26
HINT3Q9NQE9 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
HINT3Q9NQE9 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.66■□□□□ 0.26
HINT3Q9NQE9 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
HINT3Q9NQE9 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.66■□□□□ 0.26
HINT3Q9NQE9 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.66■□□□□ 0.26
HINT3Q9NQE9 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HINT3Q9NQE9 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.66■□□□□ 0.26
HINT3Q9NQE9 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
HINT3Q9NQE9 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HINT3Q9NQE9 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HINT3Q9NQE9 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HINT3Q9NQE9 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.66■□□□□ 0.26
HINT3Q9NQE9 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.66■□□□□ 0.26
HINT3Q9NQE9 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
HINT3Q9NQE9 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.66■□□□□ 0.26
HINT3Q9NQE9 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
HINT3Q9NQE9 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
HINT3Q9NQE9 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.66■□□□□ 0.26
HINT3Q9NQE9 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.65■□□□□ 0.26
HINT3Q9NQE9 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HINT3Q9NQE9 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
HINT3Q9NQE9 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HINT3Q9NQE9 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HINT3Q9NQE9 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HINT3Q9NQE9 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HINT3Q9NQE9 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HINT3Q9NQE9 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
HINT3Q9NQE9 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HINT3Q9NQE9 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HINT3Q9NQE9 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.65■□□□□ 0.26
HINT3Q9NQE9 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.65■□□□□ 0.26
HINT3Q9NQE9 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.65■□□□□ 0.26
HINT3Q9NQE9 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HINT3Q9NQE9 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HINT3Q9NQE9 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
HINT3Q9NQE9 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HINT3Q9NQE9 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HINT3Q9NQE9 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HINT3Q9NQE9 SLC25A6P5-201ENST00000435663 894 ntBASIC16.65■□□□□ 0.26
HINT3Q9NQE9 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.65■□□□□ 0.26
HINT3Q9NQE9 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.65■□□□□ 0.26
HINT3Q9NQE9 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.65■□□□□ 0.26
HINT3Q9NQE9 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.65■□□□□ 0.26
HINT3Q9NQE9 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.65■□□□□ 0.26
HINT3Q9NQE9 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.65■□□□□ 0.26
HINT3Q9NQE9 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.65■□□□□ 0.26
HINT3Q9NQE9 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
HINT3Q9NQE9 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
HINT3Q9NQE9 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HINT3Q9NQE9 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
HINT3Q9NQE9 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
HINT3Q9NQE9 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
HINT3Q9NQE9 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HINT3Q9NQE9 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
HINT3Q9NQE9 KRT17P2-201ENST00000300992 1314 ntBASIC16.65■□□□□ 0.26
HINT3Q9NQE9 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HINT3Q9NQE9 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HINT3Q9NQE9 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
HINT3Q9NQE9 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.65■□□□□ 0.26
HINT3Q9NQE9 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
HINT3Q9NQE9 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
HINT3Q9NQE9 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.65■□□□□ 0.26
HINT3Q9NQE9 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.64■□□□□ 0.26
HINT3Q9NQE9 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
HINT3Q9NQE9 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
HINT3Q9NQE9 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HINT3Q9NQE9 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HINT3Q9NQE9 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HINT3Q9NQE9 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HINT3Q9NQE9 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.64■□□□□ 0.25
HINT3Q9NQE9 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HINT3Q9NQE9 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HINT3Q9NQE9 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
HINT3Q9NQE9 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HINT3Q9NQE9 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
HINT3Q9NQE9 KSR1P1-201ENST00000446298 240 ntBASIC16.64■□□□□ 0.25
HINT3Q9NQE9 KRT18P41-201ENST00000518924 1277 ntBASIC16.64■□□□□ 0.25
HINT3Q9NQE9 MIR4785-201ENST00000585005 73 ntBASIC16.64■□□□□ 0.25
HINT3Q9NQE9 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HINT3Q9NQE9 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.64■□□□□ 0.25
HINT3Q9NQE9 CD177P1-201ENST00000606252 935 ntBASIC16.64■□□□□ 0.25
HINT3Q9NQE9 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HINT3Q9NQE9 HTR7P1-202ENST00000624664 4411 ntBASIC16.64■□□□□ 0.25
HINT3Q9NQE9 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HINT3Q9NQE9 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HINT3Q9NQE9 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HINT3Q9NQE9 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HINT3Q9NQE9 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HINT3Q9NQE9 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms