Protein–RNA interactions for Protein: Q9NP61

ARFGAP3, ADP-ribosylation factor GTPase-activating protein 3, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP3Q9NP61 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ARFGAP3Q9NP61 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
ARFGAP3Q9NP61 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
ARFGAP3Q9NP61 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
ARFGAP3Q9NP61 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
ARFGAP3Q9NP61 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ARFGAP3Q9NP61 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ARFGAP3Q9NP61 AL139384.1-201ENST00000612143 3047 ntBASIC19.7■□□□□ 0.74
ARFGAP3Q9NP61 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ARFGAP3Q9NP61 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
ARFGAP3Q9NP61 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ARFGAP3Q9NP61 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
ARFGAP3Q9NP61 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARFGAP3Q9NP61 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARFGAP3Q9NP61 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.7■□□□□ 0.74
ARFGAP3Q9NP61 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC19.7■□□□□ 0.74
ARFGAP3Q9NP61 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
ARFGAP3Q9NP61 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARFGAP3Q9NP61 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
ARFGAP3Q9NP61 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.7■□□□□ 0.74
ARFGAP3Q9NP61 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.7■□□□□ 0.74
ARFGAP3Q9NP61 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
ARFGAP3Q9NP61 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
ARFGAP3Q9NP61 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.7■□□□□ 0.74
ARFGAP3Q9NP61 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARFGAP3Q9NP61 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
ARFGAP3Q9NP61 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ARFGAP3Q9NP61 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.7■□□□□ 0.74
ARFGAP3Q9NP61 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
ARFGAP3Q9NP61 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
ARFGAP3Q9NP61 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARFGAP3Q9NP61 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARFGAP3Q9NP61 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.69■□□□□ 0.74
ARFGAP3Q9NP61 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARFGAP3Q9NP61 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
ARFGAP3Q9NP61 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARFGAP3Q9NP61 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC19.69■□□□□ 0.74
ARFGAP3Q9NP61 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARFGAP3Q9NP61 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ARFGAP3Q9NP61 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARFGAP3Q9NP61 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARFGAP3Q9NP61 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ARFGAP3Q9NP61 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC19.69■□□□□ 0.74
ARFGAP3Q9NP61 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARFGAP3Q9NP61 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.69■□□□□ 0.74
ARFGAP3Q9NP61 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ARFGAP3Q9NP61 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARFGAP3Q9NP61 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.69■□□□□ 0.74
ARFGAP3Q9NP61 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.69■□□□□ 0.74
ARFGAP3Q9NP61 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.69■□□□□ 0.74
ARFGAP3Q9NP61 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ARFGAP3Q9NP61 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
ARFGAP3Q9NP61 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ARFGAP3Q9NP61 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
ARFGAP3Q9NP61 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
ARFGAP3Q9NP61 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARFGAP3Q9NP61 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARFGAP3Q9NP61 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARFGAP3Q9NP61 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.69■□□□□ 0.74
ARFGAP3Q9NP61 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ARFGAP3Q9NP61 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.69■□□□□ 0.74
ARFGAP3Q9NP61 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.68■□□□□ 0.74
ARFGAP3Q9NP61 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
ARFGAP3Q9NP61 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ARFGAP3Q9NP61 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ARFGAP3Q9NP61 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ARFGAP3Q9NP61 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
ARFGAP3Q9NP61 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ARFGAP3Q9NP61 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.68■□□□□ 0.74
ARFGAP3Q9NP61 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.68■□□□□ 0.74
ARFGAP3Q9NP61 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ARFGAP3Q9NP61 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ARFGAP3Q9NP61 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ARFGAP3Q9NP61 AL158047.1-201ENST00000445918 881 ntBASIC19.68■□□□□ 0.74
ARFGAP3Q9NP61 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.68■□□□□ 0.74
ARFGAP3Q9NP61 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19.68■□□□□ 0.74
ARFGAP3Q9NP61 C1QBPP2-201ENST00000528754 825 ntBASIC19.68■□□□□ 0.74
ARFGAP3Q9NP61 AL023875.1-201ENST00000640777 796 ntBASIC19.68■□□□□ 0.74
ARFGAP3Q9NP61 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
ARFGAP3Q9NP61 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.68■□□□□ 0.74
ARFGAP3Q9NP61 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ARFGAP3Q9NP61 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
ARFGAP3Q9NP61 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ARFGAP3Q9NP61 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ARFGAP3Q9NP61 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.68■□□□□ 0.74
ARFGAP3Q9NP61 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ARFGAP3Q9NP61 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ARFGAP3Q9NP61 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ARFGAP3Q9NP61 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
ARFGAP3Q9NP61 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.67■□□□□ 0.74
ARFGAP3Q9NP61 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
ARFGAP3Q9NP61 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ARFGAP3Q9NP61 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.67■□□□□ 0.74
ARFGAP3Q9NP61 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.67■□□□□ 0.74
ARFGAP3Q9NP61 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ARFGAP3Q9NP61 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
ARFGAP3Q9NP61 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.67■□□□□ 0.74
ARFGAP3Q9NP61 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
ARFGAP3Q9NP61 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ARFGAP3Q9NP61 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms