Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
VAT1LQ9HCJ6 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC21.31■■□□□ 1
VAT1LQ9HCJ6 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
VAT1LQ9HCJ6 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
VAT1LQ9HCJ6 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
VAT1LQ9HCJ6 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
VAT1LQ9HCJ6 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC21.31■■□□□ 1
VAT1LQ9HCJ6 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
VAT1LQ9HCJ6 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
VAT1LQ9HCJ6 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC21.31■■□□□ 1
VAT1LQ9HCJ6 MIR662-201ENST00000384847 95 ntBASIC21.31■■□□□ 1
VAT1LQ9HCJ6 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
VAT1LQ9HCJ6 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC21.31■■□□□ 1
VAT1LQ9HCJ6 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC21.31■■□□□ 1
VAT1LQ9HCJ6 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
VAT1LQ9HCJ6 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
VAT1LQ9HCJ6 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC21.31■■□□□ 1
VAT1LQ9HCJ6 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC21.3■■□□□ 1
VAT1LQ9HCJ6 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC21.3■■□□□ 1
VAT1LQ9HCJ6 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
VAT1LQ9HCJ6 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC21.3■■□□□ 1
VAT1LQ9HCJ6 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC21.3■■□□□ 1
VAT1LQ9HCJ6 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
VAT1LQ9HCJ6 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
VAT1LQ9HCJ6 AC093503.3-201ENST00000624917 2352 ntBASIC21.3■■□□□ 1
VAT1LQ9HCJ6 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC21.3■■□□□ 1
VAT1LQ9HCJ6 AC004408.2-201ENST00000623613 2777 ntBASIC21.3■■□□□ 1
VAT1LQ9HCJ6 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
VAT1LQ9HCJ6 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC21.3■■□□□ 1
VAT1LQ9HCJ6 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC21.3■■□□□ 1
VAT1LQ9HCJ6 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC21.3■■□□□ 1
VAT1LQ9HCJ6 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC21.3■■□□□ 1
VAT1LQ9HCJ6 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC21.3■■□□□ 1
VAT1LQ9HCJ6 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC21.3■■□□□ 1
VAT1LQ9HCJ6 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
VAT1LQ9HCJ6 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC21.3■■□□□ 1
VAT1LQ9HCJ6 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC21.3■■□□□ 1
VAT1LQ9HCJ6 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
VAT1LQ9HCJ6 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC21.3■■□□□ 1
VAT1LQ9HCJ6 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC21.29■■□□□ 1
VAT1LQ9HCJ6 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VAT1LQ9HCJ6 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VAT1LQ9HCJ6 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VAT1LQ9HCJ6 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VAT1LQ9HCJ6 ADK-206ENST00000541550 2222 ntTSL 2 BASIC21.29■■□□□ 1
VAT1LQ9HCJ6 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC21.29■■□□□ 1
VAT1LQ9HCJ6 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC21.29■■□□□ 1
VAT1LQ9HCJ6 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC21.29■■□□□ 1
VAT1LQ9HCJ6 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC21.29■■□□□ 1
VAT1LQ9HCJ6 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VAT1LQ9HCJ6 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC21.29■■□□□ 1
VAT1LQ9HCJ6 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC21.29■■□□□ 1
VAT1LQ9HCJ6 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC21.29■■□□□ 1
VAT1LQ9HCJ6 NMU-205ENST00000511469 756 ntTSL 3 BASIC21.29■■□□□ 1
VAT1LQ9HCJ6 AC009065.1-201ENST00000564055 1225 ntBASIC21.29■■□□□ 1
VAT1LQ9HCJ6 RNF126P1-202ENST00000569893 925 ntBASIC21.29■■□□□ 1
VAT1LQ9HCJ6 NAA38-203ENST00000575071 553 ntTSL 2 BASIC21.29■■□□□ 1
VAT1LQ9HCJ6 AC011498.5-201ENST00000592027 486 ntBASIC21.29■■□□□ 1
VAT1LQ9HCJ6 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC21.29■■□□□ 1
VAT1LQ9HCJ6 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC21.29■■□□□ 1
VAT1LQ9HCJ6 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VAT1LQ9HCJ6 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VAT1LQ9HCJ6 TNXA-203ENST00000507684 2038 ntBASIC21.29■■□□□ 1
VAT1LQ9HCJ6 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
VAT1LQ9HCJ6 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC21.29■■□□□ 1
VAT1LQ9HCJ6 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VAT1LQ9HCJ6 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
VAT1LQ9HCJ6 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
VAT1LQ9HCJ6 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC21.28■■□□□ 1
VAT1LQ9HCJ6 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VAT1LQ9HCJ6 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VAT1LQ9HCJ6 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VAT1LQ9HCJ6 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC21.28■■□□□ 1
VAT1LQ9HCJ6 CNP-204ENST00000472031 1019 ntTSL 2 BASIC21.28■■□□□ 1
VAT1LQ9HCJ6 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC21.28■■□□□ 1
VAT1LQ9HCJ6 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC21.28■■□□□ 1
VAT1LQ9HCJ6 LITAF-220ENST00000620789 692 ntTSL 5 BASIC21.28■■□□□ 1
VAT1LQ9HCJ6 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
VAT1LQ9HCJ6 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
VAT1LQ9HCJ6 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC21.28■■□□□ 1
VAT1LQ9HCJ6 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC21.28■■□□□ 1
VAT1LQ9HCJ6 BX323043.1-201ENST00000641006 1765 ntBASIC21.28■■□□□ 1
VAT1LQ9HCJ6 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VAT1LQ9HCJ6 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VAT1LQ9HCJ6 SDHAP2-201ENST00000455183 2001 ntBASIC21.28■■□□□ 1
VAT1LQ9HCJ6 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
VAT1LQ9HCJ6 AC009102.3-201ENST00000623118 1491 ntBASIC21.27■■□□□ 1
VAT1LQ9HCJ6 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
VAT1LQ9HCJ6 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VAT1LQ9HCJ6 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
VAT1LQ9HCJ6 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
VAT1LQ9HCJ6 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC21.27■■□□□ 1
VAT1LQ9HCJ6 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC21.27■■□□□ 1
VAT1LQ9HCJ6 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC21.27■■□□□ 1
VAT1LQ9HCJ6 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VAT1LQ9HCJ6 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC21.27■■□□□ 1
VAT1LQ9HCJ6 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC21.27■■□□□ 1
VAT1LQ9HCJ6 MIR149-201ENST00000384879 89 ntBASIC21.27■■□□□ 1
VAT1LQ9HCJ6 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC21.27■■□□□ 1
VAT1LQ9HCJ6 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms