Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MRM3Q9HC36 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MRM3Q9HC36 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MRM3Q9HC36 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
MRM3Q9HC36 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.42■□□□□ 0.54
MRM3Q9HC36 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MRM3Q9HC36 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
MRM3Q9HC36 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MRM3Q9HC36 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MRM3Q9HC36 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.42■□□□□ 0.54
MRM3Q9HC36 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.42■□□□□ 0.54
MRM3Q9HC36 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MRM3Q9HC36 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MRM3Q9HC36 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MRM3Q9HC36 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MRM3Q9HC36 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.42■□□□□ 0.54
MRM3Q9HC36 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.42■□□□□ 0.54
MRM3Q9HC36 FAM87A-204ENST00000613235 858 ntBASIC18.42■□□□□ 0.54
MRM3Q9HC36 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.42■□□□□ 0.54
MRM3Q9HC36 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MRM3Q9HC36 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
MRM3Q9HC36 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
MRM3Q9HC36 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MRM3Q9HC36 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.42■□□□□ 0.54
MRM3Q9HC36 AL096828.2-201ENST00000567259 1965 ntBASIC18.42■□□□□ 0.54
MRM3Q9HC36 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.42■□□□□ 0.54
MRM3Q9HC36 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.42■□□□□ 0.54
MRM3Q9HC36 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.42■□□□□ 0.54
MRM3Q9HC36 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
MRM3Q9HC36 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MRM3Q9HC36 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MRM3Q9HC36 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
MRM3Q9HC36 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.42■□□□□ 0.54
MRM3Q9HC36 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MRM3Q9HC36 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.42■□□□□ 0.54
MRM3Q9HC36 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MRM3Q9HC36 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MRM3Q9HC36 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.41■□□□□ 0.54
MRM3Q9HC36 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.41■□□□□ 0.54
MRM3Q9HC36 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.41■□□□□ 0.54
MRM3Q9HC36 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.41■□□□□ 0.54
MRM3Q9HC36 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MRM3Q9HC36 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
MRM3Q9HC36 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MRM3Q9HC36 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MRM3Q9HC36 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
MRM3Q9HC36 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.41■□□□□ 0.54
MRM3Q9HC36 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
MRM3Q9HC36 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MRM3Q9HC36 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.41■□□□□ 0.54
MRM3Q9HC36 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.41■□□□□ 0.54
MRM3Q9HC36 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.41■□□□□ 0.54
MRM3Q9HC36 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.41■□□□□ 0.54
MRM3Q9HC36 HMGA1P5-201ENST00000412453 271 ntBASIC18.41■□□□□ 0.54
MRM3Q9HC36 AC211429.1-201ENST00000415277 523 ntBASIC18.41■□□□□ 0.54
MRM3Q9HC36 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MRM3Q9HC36 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.41■□□□□ 0.54
MRM3Q9HC36 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.41■□□□□ 0.54
MRM3Q9HC36 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
MRM3Q9HC36 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MRM3Q9HC36 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
MRM3Q9HC36 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
MRM3Q9HC36 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
MRM3Q9HC36 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.41■□□□□ 0.54
MRM3Q9HC36 REXO1L9P-201ENST00000604264 2108 ntBASIC18.41■□□□□ 0.54
MRM3Q9HC36 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
MRM3Q9HC36 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MRM3Q9HC36 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MRM3Q9HC36 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
MRM3Q9HC36 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.41■□□□□ 0.54
MRM3Q9HC36 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MRM3Q9HC36 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MRM3Q9HC36 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.4■□□□□ 0.54
MRM3Q9HC36 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
MRM3Q9HC36 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
MRM3Q9HC36 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
MRM3Q9HC36 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MRM3Q9HC36 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.4■□□□□ 0.54
MRM3Q9HC36 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.4■□□□□ 0.54
MRM3Q9HC36 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.4■□□□□ 0.54
MRM3Q9HC36 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
MRM3Q9HC36 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MRM3Q9HC36 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MRM3Q9HC36 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MRM3Q9HC36 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MRM3Q9HC36 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MRM3Q9HC36 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.4■□□□□ 0.54
MRM3Q9HC36 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MRM3Q9HC36 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.4■□□□□ 0.54
MRM3Q9HC36 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.4■□□□□ 0.54
MRM3Q9HC36 NEK4P2-201ENST00000580004 1012 ntBASIC18.4■□□□□ 0.54
MRM3Q9HC36 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MRM3Q9HC36 AC010240.3-201ENST00000607688 395 ntBASIC18.4■□□□□ 0.54
MRM3Q9HC36 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MRM3Q9HC36 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MRM3Q9HC36 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MRM3Q9HC36 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MRM3Q9HC36 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MRM3Q9HC36 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MRM3Q9HC36 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms