Protein–RNA interactions for Protein: Q9H5V8

CDCP1, CUB domain-containing protein 1, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1Q9H5V8 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.17■□□□□ 0.34
CDCP1Q9H5V8 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDCP1Q9H5V8 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.17■□□□□ 0.34
CDCP1Q9H5V8 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.17■□□□□ 0.34
CDCP1Q9H5V8 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDCP1Q9H5V8 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDCP1Q9H5V8 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.17■□□□□ 0.34
CDCP1Q9H5V8 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDCP1Q9H5V8 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDCP1Q9H5V8 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CDCP1Q9H5V8 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDCP1Q9H5V8 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDCP1Q9H5V8 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.16■□□□□ 0.34
CDCP1Q9H5V8 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.16■□□□□ 0.34
CDCP1Q9H5V8 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.16■□□□□ 0.34
CDCP1Q9H5V8 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDCP1Q9H5V8 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDCP1Q9H5V8 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDCP1Q9H5V8 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDCP1Q9H5V8 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDCP1Q9H5V8 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.16■□□□□ 0.34
CDCP1Q9H5V8 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CDCP1Q9H5V8 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.16■□□□□ 0.34
CDCP1Q9H5V8 AC010240.3-201ENST00000607688 395 ntBASIC17.16■□□□□ 0.34
CDCP1Q9H5V8 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDCP1Q9H5V8 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.16■□□□□ 0.34
CDCP1Q9H5V8 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
CDCP1Q9H5V8 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDCP1Q9H5V8 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDCP1Q9H5V8 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.16■□□□□ 0.34
CDCP1Q9H5V8 AL357033.4-201ENST00000617703 1807 ntBASIC17.16■□□□□ 0.34
CDCP1Q9H5V8 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CDCP1Q9H5V8 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDCP1Q9H5V8 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CDCP1Q9H5V8 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDCP1Q9H5V8 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.16■□□□□ 0.34
CDCP1Q9H5V8 AC106820.2-201ENST00000563775 3264 ntBASIC17.16■□□□□ 0.34
CDCP1Q9H5V8 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDCP1Q9H5V8 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDCP1Q9H5V8 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDCP1Q9H5V8 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDCP1Q9H5V8 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.16■□□□□ 0.34
CDCP1Q9H5V8 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDCP1Q9H5V8 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDCP1Q9H5V8 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDCP1Q9H5V8 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDCP1Q9H5V8 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDCP1Q9H5V8 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDCP1Q9H5V8 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.15■□□□□ 0.34
CDCP1Q9H5V8 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDCP1Q9H5V8 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.15■□□□□ 0.34
CDCP1Q9H5V8 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.15■□□□□ 0.34
CDCP1Q9H5V8 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDCP1Q9H5V8 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDCP1Q9H5V8 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
CDCP1Q9H5V8 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.15■□□□□ 0.34
CDCP1Q9H5V8 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDCP1Q9H5V8 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.15■□□□□ 0.34
CDCP1Q9H5V8 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.15■□□□□ 0.34
CDCP1Q9H5V8 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.15■□□□□ 0.34
CDCP1Q9H5V8 AC093458.2-201ENST00000623150 629 ntBASIC17.15■□□□□ 0.34
CDCP1Q9H5V8 AC079602.3-201ENST00000623931 403 ntBASIC17.15■□□□□ 0.34
CDCP1Q9H5V8 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.15■□□□□ 0.34
CDCP1Q9H5V8 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDCP1Q9H5V8 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.15■□□□□ 0.34
CDCP1Q9H5V8 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDCP1Q9H5V8 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDCP1Q9H5V8 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.15■□□□□ 0.34
CDCP1Q9H5V8 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDCP1Q9H5V8 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CDCP1Q9H5V8 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDCP1Q9H5V8 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.15■□□□□ 0.34
CDCP1Q9H5V8 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.15■□□□□ 0.34
CDCP1Q9H5V8 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDCP1Q9H5V8 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CDCP1Q9H5V8 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CDCP1Q9H5V8 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.14■□□□□ 0.33
CDCP1Q9H5V8 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDCP1Q9H5V8 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDCP1Q9H5V8 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDCP1Q9H5V8 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDCP1Q9H5V8 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.14■□□□□ 0.33
CDCP1Q9H5V8 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.14■□□□□ 0.33
CDCP1Q9H5V8 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.14■□□□□ 0.33
CDCP1Q9H5V8 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.14■□□□□ 0.33
CDCP1Q9H5V8 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDCP1Q9H5V8 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDCP1Q9H5V8 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDCP1Q9H5V8 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CDCP1Q9H5V8 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDCP1Q9H5V8 SPDYE13P-201ENST00000445314 798 ntBASIC17.14■□□□□ 0.33
CDCP1Q9H5V8 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.14■□□□□ 0.33
CDCP1Q9H5V8 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.14■□□□□ 0.33
CDCP1Q9H5V8 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
CDCP1Q9H5V8 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.14■□□□□ 0.33
CDCP1Q9H5V8 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDCP1Q9H5V8 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDCP1Q9H5V8 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDCP1Q9H5V8 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CDCP1Q9H5V8 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms