Protein–RNA interactions for Protein: Q9H1D9

POLR3F, DNA-directed RNA polymerase III subunit RPC6, humanhuman

Predicted RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3FQ9H1D9 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
POLR3FQ9H1D9 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
POLR3FQ9H1D9 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
POLR3FQ9H1D9 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
POLR3FQ9H1D9 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
POLR3FQ9H1D9 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
POLR3FQ9H1D9 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.24■□□□□ 0.83
POLR3FQ9H1D9 AL024508.2-201ENST00000607749 1894 ntBASIC20.24■□□□□ 0.83
POLR3FQ9H1D9 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.23■□□□□ 0.83
POLR3FQ9H1D9 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
POLR3FQ9H1D9 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
POLR3FQ9H1D9 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
POLR3FQ9H1D9 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
POLR3FQ9H1D9 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
POLR3FQ9H1D9 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
POLR3FQ9H1D9 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
POLR3FQ9H1D9 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
POLR3FQ9H1D9 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
POLR3FQ9H1D9 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
POLR3FQ9H1D9 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.23■□□□□ 0.83
POLR3FQ9H1D9 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.23■□□□□ 0.83
POLR3FQ9H1D9 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
POLR3FQ9H1D9 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
POLR3FQ9H1D9 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
POLR3FQ9H1D9 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
POLR3FQ9H1D9 AC069148.1-201ENST00000608741 768 ntBASIC20.23■□□□□ 0.83
POLR3FQ9H1D9 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC20.23■□□□□ 0.83
POLR3FQ9H1D9 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
POLR3FQ9H1D9 AC004408.2-201ENST00000623613 2777 ntBASIC20.23■□□□□ 0.83
POLR3FQ9H1D9 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.23■□□□□ 0.83
POLR3FQ9H1D9 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
POLR3FQ9H1D9 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.23■□□□□ 0.83
POLR3FQ9H1D9 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
POLR3FQ9H1D9 WIZP1-201ENST00000531444 2299 ntBASIC20.23■□□□□ 0.83
POLR3FQ9H1D9 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.23■□□□□ 0.83
POLR3FQ9H1D9 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
POLR3FQ9H1D9 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.22■□□□□ 0.83
POLR3FQ9H1D9 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.22■□□□□ 0.83
POLR3FQ9H1D9 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
POLR3FQ9H1D9 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
POLR3FQ9H1D9 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
POLR3FQ9H1D9 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
POLR3FQ9H1D9 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
POLR3FQ9H1D9 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.22■□□□□ 0.83
POLR3FQ9H1D9 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.22■□□□□ 0.83
POLR3FQ9H1D9 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
POLR3FQ9H1D9 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.22■□□□□ 0.83
POLR3FQ9H1D9 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
POLR3FQ9H1D9 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
POLR3FQ9H1D9 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
POLR3FQ9H1D9 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.22■□□□□ 0.83
POLR3FQ9H1D9 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.22■□□□□ 0.83
POLR3FQ9H1D9 AC005332.3-201ENST00000589904 676 ntBASIC20.22■□□□□ 0.83
POLR3FQ9H1D9 Z83836.1-201ENST00000624605 1642 ntBASIC20.22■□□□□ 0.83
POLR3FQ9H1D9 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
POLR3FQ9H1D9 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
POLR3FQ9H1D9 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
POLR3FQ9H1D9 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.22■□□□□ 0.83
POLR3FQ9H1D9 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.22■□□□□ 0.83
POLR3FQ9H1D9 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
POLR3FQ9H1D9 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.22■□□□□ 0.83
POLR3FQ9H1D9 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.22■□□□□ 0.83
POLR3FQ9H1D9 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
POLR3FQ9H1D9 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
POLR3FQ9H1D9 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
POLR3FQ9H1D9 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
POLR3FQ9H1D9 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
POLR3FQ9H1D9 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.21■□□□□ 0.83
POLR3FQ9H1D9 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
POLR3FQ9H1D9 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
POLR3FQ9H1D9 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
POLR3FQ9H1D9 TSPY22P-201ENST00000427496 604 ntBASIC20.21■□□□□ 0.83
POLR3FQ9H1D9 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
POLR3FQ9H1D9 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC20.21■□□□□ 0.83
POLR3FQ9H1D9 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
POLR3FQ9H1D9 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.21■□□□□ 0.83
POLR3FQ9H1D9 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.21■□□□□ 0.83
POLR3FQ9H1D9 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.21■□□□□ 0.83
POLR3FQ9H1D9 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.21■□□□□ 0.83
POLR3FQ9H1D9 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.21■□□□□ 0.83
POLR3FQ9H1D9 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
POLR3FQ9H1D9 AL390719.2-201ENST00000606993 987 ntBASIC20.21■□□□□ 0.83
POLR3FQ9H1D9 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
POLR3FQ9H1D9 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
POLR3FQ9H1D9 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
POLR3FQ9H1D9 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
POLR3FQ9H1D9 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.21■□□□□ 0.83
POLR3FQ9H1D9 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.21■□□□□ 0.83
POLR3FQ9H1D9 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.21■□□□□ 0.83
POLR3FQ9H1D9 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
POLR3FQ9H1D9 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
POLR3FQ9H1D9 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
POLR3FQ9H1D9 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
POLR3FQ9H1D9 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
POLR3FQ9H1D9 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.21■□□□□ 0.83
POLR3FQ9H1D9 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
POLR3FQ9H1D9 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.21■□□□□ 0.83
POLR3FQ9H1D9 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
POLR3FQ9H1D9 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
POLR3FQ9H1D9 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms