Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VGLL1Q99990 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
VGLL1Q99990 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC13.99□□□□□ -0.17
VGLL1Q99990 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VGLL1Q99990 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VGLL1Q99990 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VGLL1Q99990 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC13.99□□□□□ -0.17
VGLL1Q99990 KRT8P45-201ENST00000414328 1447 ntBASIC13.98□□□□□ -0.17
VGLL1Q99990 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VGLL1Q99990 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
VGLL1Q99990 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
VGLL1Q99990 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VGLL1Q99990 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
VGLL1Q99990 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC13.98□□□□□ -0.17
VGLL1Q99990 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
VGLL1Q99990 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
VGLL1Q99990 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VGLL1Q99990 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC13.98□□□□□ -0.17
VGLL1Q99990 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
VGLL1Q99990 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VGLL1Q99990 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VGLL1Q99990 AC093677.2-201ENST00000600169 1863 ntBASIC13.98□□□□□ -0.17
VGLL1Q99990 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VGLL1Q99990 OR6D1P-202ENST00000641007 5290 ntBASIC13.98□□□□□ -0.17
VGLL1Q99990 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VGLL1Q99990 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
VGLL1Q99990 SERF2-207ENST00000409614 582 ntTSL 2 BASIC13.98□□□□□ -0.17
VGLL1Q99990 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC13.98□□□□□ -0.17
VGLL1Q99990 AC091390.4-202ENST00000476426 537 ntBASIC13.98□□□□□ -0.17
VGLL1Q99990 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC13.98□□□□□ -0.17
VGLL1Q99990 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC13.98□□□□□ -0.17
VGLL1Q99990 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
VGLL1Q99990 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VGLL1Q99990 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VGLL1Q99990 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
VGLL1Q99990 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
VGLL1Q99990 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC13.98□□□□□ -0.17
VGLL1Q99990 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VGLL1Q99990 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
VGLL1Q99990 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
VGLL1Q99990 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VGLL1Q99990 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VGLL1Q99990 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
VGLL1Q99990 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
VGLL1Q99990 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
VGLL1Q99990 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
VGLL1Q99990 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
VGLL1Q99990 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC13.97□□□□□ -0.17
VGLL1Q99990 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
VGLL1Q99990 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VGLL1Q99990 AC012313.1-201ENST00000593393 3059 ntBASIC13.97□□□□□ -0.17
VGLL1Q99990 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
VGLL1Q99990 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC13.97□□□□□ -0.17
VGLL1Q99990 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC13.97□□□□□ -0.17
VGLL1Q99990 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
VGLL1Q99990 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
VGLL1Q99990 ESPNP-201ENST00000270691 2015 ntBASIC13.97□□□□□ -0.17
VGLL1Q99990 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VGLL1Q99990 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VGLL1Q99990 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
VGLL1Q99990 RCC2P3-201ENST00000418112 1537 ntBASIC13.97□□□□□ -0.17
VGLL1Q99990 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VGLL1Q99990 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
VGLL1Q99990 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VGLL1Q99990 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC13.97□□□□□ -0.17
VGLL1Q99990 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VGLL1Q99990 NIFKP9-201ENST00000419265 221 ntBASIC13.97□□□□□ -0.17
VGLL1Q99990 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
VGLL1Q99990 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
VGLL1Q99990 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC13.97□□□□□ -0.17
VGLL1Q99990 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC13.97□□□□□ -0.17
VGLL1Q99990 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC13.97□□□□□ -0.17
VGLL1Q99990 MMAB-206ENST00000540016 945 ntTSL 3 BASIC13.97□□□□□ -0.17
VGLL1Q99990 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VGLL1Q99990 EMC9-206ENST00000560403 872 ntTSL 2 BASIC13.97□□□□□ -0.17
VGLL1Q99990 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC13.97□□□□□ -0.17
VGLL1Q99990 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC13.97□□□□□ -0.17
VGLL1Q99990 AC124016.1-201ENST00000609552 612 ntBASIC13.97□□□□□ -0.17
VGLL1Q99990 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VGLL1Q99990 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VGLL1Q99990 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VGLL1Q99990 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC13.97□□□□□ -0.17
VGLL1Q99990 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
VGLL1Q99990 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC13.97□□□□□ -0.17
VGLL1Q99990 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VGLL1Q99990 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
VGLL1Q99990 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
VGLL1Q99990 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
VGLL1Q99990 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
VGLL1Q99990 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VGLL1Q99990 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC13.97□□□□□ -0.17
VGLL1Q99990 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VGLL1Q99990 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
VGLL1Q99990 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
VGLL1Q99990 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VGLL1Q99990 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC13.96□□□□□ -0.17
VGLL1Q99990 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VGLL1Q99990 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
VGLL1Q99990 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC13.96□□□□□ -0.17
VGLL1Q99990 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms