Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
BBS4Q96RK4 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BBS4Q96RK4 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.48■□□□□ 0.39
BBS4Q96RK4 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BBS4Q96RK4 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BBS4Q96RK4 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BBS4Q96RK4 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BBS4Q96RK4 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BBS4Q96RK4 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
BBS4Q96RK4 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
BBS4Q96RK4 MMP23A-201ENST00000234610 1017 ntBASIC17.47■□□□□ 0.39
BBS4Q96RK4 TSPY14P-201ENST00000303979 915 ntBASIC17.47■□□□□ 0.39
BBS4Q96RK4 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.47■□□□□ 0.39
BBS4Q96RK4 AC007663.1-201ENST00000438948 1240 ntBASIC17.47■□□□□ 0.39
BBS4Q96RK4 AC128688.1-201ENST00000487626 519 ntBASIC17.47■□□□□ 0.39
BBS4Q96RK4 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.47■□□□□ 0.39
BBS4Q96RK4 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BBS4Q96RK4 EGLN1P1-201ENST00000531623 762 ntBASIC17.47■□□□□ 0.39
BBS4Q96RK4 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.47■□□□□ 0.39
BBS4Q96RK4 NAPSB-206ENST00000562112 1266 ntBASIC17.47■□□□□ 0.39
BBS4Q96RK4 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
BBS4Q96RK4 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
BBS4Q96RK4 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
BBS4Q96RK4 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
BBS4Q96RK4 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
BBS4Q96RK4 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BBS4Q96RK4 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BBS4Q96RK4 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
BBS4Q96RK4 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BBS4Q96RK4 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.47■□□□□ 0.39
BBS4Q96RK4 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BBS4Q96RK4 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
BBS4Q96RK4 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
BBS4Q96RK4 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
BBS4Q96RK4 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BBS4Q96RK4 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.47■□□□□ 0.39
BBS4Q96RK4 AC135050.7-201ENST00000624508 2218 ntBASIC17.47■□□□□ 0.39
BBS4Q96RK4 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
BBS4Q96RK4 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BBS4Q96RK4 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BBS4Q96RK4 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BBS4Q96RK4 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
BBS4Q96RK4 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
BBS4Q96RK4 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
BBS4Q96RK4 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BBS4Q96RK4 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.46■□□□□ 0.39
BBS4Q96RK4 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BBS4Q96RK4 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.46■□□□□ 0.39
BBS4Q96RK4 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
BBS4Q96RK4 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.46■□□□□ 0.39
BBS4Q96RK4 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
BBS4Q96RK4 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.46■□□□□ 0.39
BBS4Q96RK4 AL596275.1-201ENST00000423464 877 ntBASIC17.46■□□□□ 0.39
BBS4Q96RK4 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
BBS4Q96RK4 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
BBS4Q96RK4 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.46■□□□□ 0.39
BBS4Q96RK4 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.46■□□□□ 0.39
BBS4Q96RK4 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
BBS4Q96RK4 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BBS4Q96RK4 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
BBS4Q96RK4 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BBS4Q96RK4 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.46■□□□□ 0.39
BBS4Q96RK4 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
BBS4Q96RK4 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.46■□□□□ 0.39
BBS4Q96RK4 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
BBS4Q96RK4 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.46■□□□□ 0.38
BBS4Q96RK4 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BBS4Q96RK4 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
BBS4Q96RK4 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
BBS4Q96RK4 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BBS4Q96RK4 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.45■□□□□ 0.38
BBS4Q96RK4 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BBS4Q96RK4 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BBS4Q96RK4 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.45■□□□□ 0.38
BBS4Q96RK4 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
BBS4Q96RK4 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
BBS4Q96RK4 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BBS4Q96RK4 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
BBS4Q96RK4 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
BBS4Q96RK4 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
BBS4Q96RK4 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.45■□□□□ 0.38
BBS4Q96RK4 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
BBS4Q96RK4 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.45■□□□□ 0.38
BBS4Q96RK4 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.45■□□□□ 0.38
BBS4Q96RK4 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.45■□□□□ 0.38
BBS4Q96RK4 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.45■□□□□ 0.38
BBS4Q96RK4 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
BBS4Q96RK4 CR769767.2-201ENST00000622735 460 ntBASIC17.45■□□□□ 0.38
BBS4Q96RK4 AC010653.2-201ENST00000623505 997 ntBASIC17.45■□□□□ 0.38
BBS4Q96RK4 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BBS4Q96RK4 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
BBS4Q96RK4 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
BBS4Q96RK4 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.45■□□□□ 0.38
BBS4Q96RK4 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
BBS4Q96RK4 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
BBS4Q96RK4 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
BBS4Q96RK4 KRT8P9-201ENST00000558927 1449 ntBASIC17.45■□□□□ 0.38
BBS4Q96RK4 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
BBS4Q96RK4 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BBS4Q96RK4 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms