Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MS4A4EQ96PG1 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MS4A4EQ96PG1 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
MS4A4EQ96PG1 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
MS4A4EQ96PG1 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MS4A4EQ96PG1 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
MS4A4EQ96PG1 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
MS4A4EQ96PG1 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
MS4A4EQ96PG1 AC135776.1-201ENST00000319817 2481 ntBASIC17.19■□□□□ 0.34
MS4A4EQ96PG1 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
MS4A4EQ96PG1 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MS4A4EQ96PG1 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.18■□□□□ 0.34
MS4A4EQ96PG1 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MS4A4EQ96PG1 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
MS4A4EQ96PG1 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MS4A4EQ96PG1 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.18■□□□□ 0.34
MS4A4EQ96PG1 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
MS4A4EQ96PG1 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.18■□□□□ 0.34
MS4A4EQ96PG1 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MS4A4EQ96PG1 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
MS4A4EQ96PG1 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MS4A4EQ96PG1 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
MS4A4EQ96PG1 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MS4A4EQ96PG1 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MS4A4EQ96PG1 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
MS4A4EQ96PG1 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MS4A4EQ96PG1 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MS4A4EQ96PG1 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MS4A4EQ96PG1 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.18■□□□□ 0.34
MS4A4EQ96PG1 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MS4A4EQ96PG1 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MS4A4EQ96PG1 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.18■□□□□ 0.34
MS4A4EQ96PG1 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.18■□□□□ 0.34
MS4A4EQ96PG1 AC104390.1-201ENST00000555663 520 ntBASIC17.18■□□□□ 0.34
MS4A4EQ96PG1 MIR3180-4-201ENST00000582223 153 ntBASIC17.18■□□□□ 0.34
MS4A4EQ96PG1 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
MS4A4EQ96PG1 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
MS4A4EQ96PG1 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.18■□□□□ 0.34
MS4A4EQ96PG1 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
MS4A4EQ96PG1 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.18■□□□□ 0.34
MS4A4EQ96PG1 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MS4A4EQ96PG1 GMCL1P1-201ENST00000463439 1581 ntBASIC17.18■□□□□ 0.34
MS4A4EQ96PG1 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MS4A4EQ96PG1 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
MS4A4EQ96PG1 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.18■□□□□ 0.34
MS4A4EQ96PG1 AC093677.2-201ENST00000600169 1863 ntBASIC17.18■□□□□ 0.34
MS4A4EQ96PG1 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
MS4A4EQ96PG1 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
MS4A4EQ96PG1 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
MS4A4EQ96PG1 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.18■□□□□ 0.34
MS4A4EQ96PG1 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MS4A4EQ96PG1 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.17■□□□□ 0.34
MS4A4EQ96PG1 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
MS4A4EQ96PG1 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MS4A4EQ96PG1 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MS4A4EQ96PG1 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.17■□□□□ 0.34
MS4A4EQ96PG1 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MS4A4EQ96PG1 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
MS4A4EQ96PG1 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.17■□□□□ 0.34
MS4A4EQ96PG1 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MS4A4EQ96PG1 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MS4A4EQ96PG1 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MS4A4EQ96PG1 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
MS4A4EQ96PG1 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MS4A4EQ96PG1 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MS4A4EQ96PG1 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.17■□□□□ 0.34
MS4A4EQ96PG1 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MS4A4EQ96PG1 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.17■□□□□ 0.34
MS4A4EQ96PG1 AC009947.2-201ENST00000444014 672 ntBASIC17.17■□□□□ 0.34
MS4A4EQ96PG1 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MS4A4EQ96PG1 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
MS4A4EQ96PG1 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.17■□□□□ 0.34
MS4A4EQ96PG1 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.17■□□□□ 0.34
MS4A4EQ96PG1 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.17■□□□□ 0.34
MS4A4EQ96PG1 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MS4A4EQ96PG1 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.17■□□□□ 0.34
MS4A4EQ96PG1 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
MS4A4EQ96PG1 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.17■□□□□ 0.34
MS4A4EQ96PG1 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MS4A4EQ96PG1 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MS4A4EQ96PG1 KRT18P22-201ENST00000402024 1347 ntBASIC17.17■□□□□ 0.34
MS4A4EQ96PG1 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MS4A4EQ96PG1 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MS4A4EQ96PG1 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MS4A4EQ96PG1 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MS4A4EQ96PG1 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
MS4A4EQ96PG1 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MS4A4EQ96PG1 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MS4A4EQ96PG1 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MS4A4EQ96PG1 ESPNP-201ENST00000270691 2015 ntBASIC17.16■□□□□ 0.34
MS4A4EQ96PG1 SDHAP2-201ENST00000455183 2001 ntBASIC17.16■□□□□ 0.34
MS4A4EQ96PG1 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.16■□□□□ 0.34
MS4A4EQ96PG1 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MS4A4EQ96PG1 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
MS4A4EQ96PG1 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MS4A4EQ96PG1 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MS4A4EQ96PG1 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.16■□□□□ 0.34
MS4A4EQ96PG1 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MS4A4EQ96PG1 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MS4A4EQ96PG1 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms