Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SLC47A1Q96FL8 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC47A1Q96FL8 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SLC47A1Q96FL8 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.39■□□□□ 0.37
SLC47A1Q96FL8 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC47A1Q96FL8 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.39■□□□□ 0.37
SLC47A1Q96FL8 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SLC47A1Q96FL8 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SLC47A1Q96FL8 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.39■□□□□ 0.37
SLC47A1Q96FL8 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
SLC47A1Q96FL8 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
SLC47A1Q96FL8 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC47A1Q96FL8 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC47A1Q96FL8 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC47A1Q96FL8 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC47A1Q96FL8 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC47A1Q96FL8 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SLC47A1Q96FL8 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.38■□□□□ 0.37
SLC47A1Q96FL8 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC47A1Q96FL8 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.38■□□□□ 0.37
SLC47A1Q96FL8 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.38■□□□□ 0.37
SLC47A1Q96FL8 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC47A1Q96FL8 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC47A1Q96FL8 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SLC47A1Q96FL8 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SLC47A1Q96FL8 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC47A1Q96FL8 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.38■□□□□ 0.37
SLC47A1Q96FL8 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SLC47A1Q96FL8 PRORSD1P-202ENST00000563365 2154 ntBASIC17.38■□□□□ 0.37
SLC47A1Q96FL8 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC47A1Q96FL8 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.38■□□□□ 0.37
SLC47A1Q96FL8 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.38■□□□□ 0.37
SLC47A1Q96FL8 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
SLC47A1Q96FL8 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SLC47A1Q96FL8 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC47A1Q96FL8 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.38■□□□□ 0.37
SLC47A1Q96FL8 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.38■□□□□ 0.37
SLC47A1Q96FL8 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.38■□□□□ 0.37
SLC47A1Q96FL8 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.38■□□□□ 0.37
SLC47A1Q96FL8 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SLC47A1Q96FL8 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC47A1Q96FL8 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC47A1Q96FL8 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
SLC47A1Q96FL8 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SLC47A1Q96FL8 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC47A1Q96FL8 AC008556.1-201ENST00000610908 2040 ntBASIC17.38■□□□□ 0.37
SLC47A1Q96FL8 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC47A1Q96FL8 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SLC47A1Q96FL8 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC47A1Q96FL8 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SLC47A1Q96FL8 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC47A1Q96FL8 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC47A1Q96FL8 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SLC47A1Q96FL8 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC47A1Q96FL8 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC47A1Q96FL8 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC47A1Q96FL8 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC47A1Q96FL8 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC47A1Q96FL8 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.37■□□□□ 0.37
SLC47A1Q96FL8 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
SLC47A1Q96FL8 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC47A1Q96FL8 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC47A1Q96FL8 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.37■□□□□ 0.37
SLC47A1Q96FL8 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SLC47A1Q96FL8 AC128676.1-201ENST00000454392 318 ntBASIC17.37■□□□□ 0.37
SLC47A1Q96FL8 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.37■□□□□ 0.37
SLC47A1Q96FL8 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC47A1Q96FL8 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC47A1Q96FL8 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.37■□□□□ 0.37
SLC47A1Q96FL8 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.37■□□□□ 0.37
SLC47A1Q96FL8 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.37■□□□□ 0.37
SLC47A1Q96FL8 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC47A1Q96FL8 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
SLC47A1Q96FL8 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.37■□□□□ 0.37
SLC47A1Q96FL8 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.37■□□□□ 0.37
SLC47A1Q96FL8 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC47A1Q96FL8 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC47A1Q96FL8 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.37■□□□□ 0.37
SLC47A1Q96FL8 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
SLC47A1Q96FL8 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
SLC47A1Q96FL8 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC47A1Q96FL8 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC47A1Q96FL8 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC47A1Q96FL8 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC47A1Q96FL8 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC47A1Q96FL8 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SLC47A1Q96FL8 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SLC47A1Q96FL8 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC47A1Q96FL8 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.36■□□□□ 0.37
SLC47A1Q96FL8 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.36■□□□□ 0.37
SLC47A1Q96FL8 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.36■□□□□ 0.37
SLC47A1Q96FL8 POU5F1P3-201ENST00000428824 1078 ntBASIC17.36■□□□□ 0.37
SLC47A1Q96FL8 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.36■□□□□ 0.37
SLC47A1Q96FL8 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.36■□□□□ 0.37
SLC47A1Q96FL8 AL445675.2-201ENST00000620291 557 ntBASIC17.36■□□□□ 0.37
SLC47A1Q96FL8 AC131212.4-201ENST00000623606 975 ntBASIC17.36■□□□□ 0.37
SLC47A1Q96FL8 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC47A1Q96FL8 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SLC47A1Q96FL8 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.36■□□□□ 0.37
SLC47A1Q96FL8 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms