Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC97Q96F63 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC97Q96F63 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC97Q96F63 AC128688.1-201ENST00000487626 519 ntBASIC18.79■□□□□ 0.6
CCDC97Q96F63 PRSS44-201ENST00000515154 1146 ntBASIC18.79■□□□□ 0.6
CCDC97Q96F63 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC97Q96F63 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC97Q96F63 NOC2LP1-202ENST00000452600 2235 ntBASIC18.79■□□□□ 0.6
CCDC97Q96F63 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC97Q96F63 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.79■□□□□ 0.6
CCDC97Q96F63 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC97Q96F63 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CCDC97Q96F63 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC97Q96F63 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC97Q96F63 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CCDC97Q96F63 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC97Q96F63 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC97Q96F63 TNXA-203ENST00000507684 2038 ntBASIC18.78■□□□□ 0.6
CCDC97Q96F63 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC97Q96F63 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC97Q96F63 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CCDC97Q96F63 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC97Q96F63 AC104076.2-201ENST00000448912 469 ntBASIC18.78■□□□□ 0.6
CCDC97Q96F63 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
CCDC97Q96F63 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
CCDC97Q96F63 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.78■□□□□ 0.6
CCDC97Q96F63 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC97Q96F63 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CCDC97Q96F63 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC97Q96F63 AC004408.2-201ENST00000623613 2777 ntBASIC18.78■□□□□ 0.6
CCDC97Q96F63 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC97Q96F63 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC97Q96F63 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC97Q96F63 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CCDC97Q96F63 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC97Q96F63 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC97Q96F63 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC97Q96F63 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC97Q96F63 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC97Q96F63 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.77■□□□□ 0.6
CCDC97Q96F63 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC97Q96F63 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC97Q96F63 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CCDC97Q96F63 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC97Q96F63 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC97Q96F63 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC97Q96F63 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CCDC97Q96F63 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CCDC97Q96F63 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC97Q96F63 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC97Q96F63 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.77■□□□□ 0.6
CCDC97Q96F63 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC97Q96F63 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC97Q96F63 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC97Q96F63 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.77■□□□□ 0.6
CCDC97Q96F63 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
CCDC97Q96F63 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC97Q96F63 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC97Q96F63 INGX-201ENST00000359239 846 ntBASIC18.77■□□□□ 0.6
CCDC97Q96F63 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC97Q96F63 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC97Q96F63 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC97Q96F63 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC97Q96F63 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC97Q96F63 EGLN1P1-201ENST00000531623 762 ntBASIC18.77■□□□□ 0.6
CCDC97Q96F63 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CCDC97Q96F63 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CCDC97Q96F63 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.77■□□□□ 0.6
CCDC97Q96F63 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CCDC97Q96F63 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC97Q96F63 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC97Q96F63 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC97Q96F63 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CCDC97Q96F63 AC093503.3-201ENST00000624917 2352 ntBASIC18.77■□□□□ 0.6
CCDC97Q96F63 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC97Q96F63 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC97Q96F63 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.77■□□□□ 0.59
CCDC97Q96F63 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.59
CCDC97Q96F63 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CCDC97Q96F63 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC97Q96F63 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC97Q96F63 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC97Q96F63 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC97Q96F63 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC97Q96F63 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC97Q96F63 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC97Q96F63 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC97Q96F63 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC97Q96F63 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC97Q96F63 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CCDC97Q96F63 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.76■□□□□ 0.59
CCDC97Q96F63 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CCDC97Q96F63 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CCDC97Q96F63 AC008622.2-201ENST00000617006 1229 ntBASIC18.76■□□□□ 0.59
CCDC97Q96F63 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CCDC97Q96F63 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC97Q96F63 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC97Q96F63 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC97Q96F63 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CCDC97Q96F63 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms