Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 AC069544.1-201ENST00000609399 999 ntBASIC17.54■□□□□ 0.4
LRRC58Q96CX6 AL109923.1-201ENST00000618799 583 ntBASIC17.54■□□□□ 0.4
LRRC58Q96CX6 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.54■□□□□ 0.4
LRRC58Q96CX6 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
LRRC58Q96CX6 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.54■□□□□ 0.4
LRRC58Q96CX6 AL109659.2-201ENST00000606809 1674 ntBASIC17.54■□□□□ 0.4
LRRC58Q96CX6 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.54■□□□□ 0.4
LRRC58Q96CX6 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
LRRC58Q96CX6 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC58Q96CX6 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.54■□□□□ 0.4
LRRC58Q96CX6 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC58Q96CX6 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.53■□□□□ 0.4
LRRC58Q96CX6 GMCL1P1-201ENST00000463439 1581 ntBASIC17.53■□□□□ 0.4
LRRC58Q96CX6 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.53■□□□□ 0.4
LRRC58Q96CX6 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC58Q96CX6 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC58Q96CX6 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.53■□□□□ 0.4
LRRC58Q96CX6 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC58Q96CX6 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
LRRC58Q96CX6 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
LRRC58Q96CX6 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
LRRC58Q96CX6 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC58Q96CX6 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
LRRC58Q96CX6 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
LRRC58Q96CX6 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC58Q96CX6 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.53■□□□□ 0.4
LRRC58Q96CX6 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.53■□□□□ 0.4
LRRC58Q96CX6 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.53■□□□□ 0.4
LRRC58Q96CX6 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC58Q96CX6 AL023875.1-201ENST00000640777 796 ntBASIC17.53■□□□□ 0.4
LRRC58Q96CX6 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.53■□□□□ 0.4
LRRC58Q96CX6 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.53■□□□□ 0.4
LRRC58Q96CX6 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC58Q96CX6 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC58Q96CX6 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.53■□□□□ 0.4
LRRC58Q96CX6 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
LRRC58Q96CX6 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC58Q96CX6 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC58Q96CX6 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.53■□□□□ 0.4
LRRC58Q96CX6 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC58Q96CX6 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRRC58Q96CX6 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
LRRC58Q96CX6 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LRRC58Q96CX6 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRRC58Q96CX6 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRRC58Q96CX6 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LRRC58Q96CX6 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRRC58Q96CX6 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRRC58Q96CX6 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LRRC58Q96CX6 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.52■□□□□ 0.4
LRRC58Q96CX6 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LRRC58Q96CX6 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRRC58Q96CX6 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.52■□□□□ 0.4
LRRC58Q96CX6 KRASP1-201ENST00000407852 552 ntBASIC17.52■□□□□ 0.4
LRRC58Q96CX6 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.52■□□□□ 0.4
LRRC58Q96CX6 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LRRC58Q96CX6 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.52■□□□□ 0.4
LRRC58Q96CX6 AC142086.2-201ENST00000569753 217 ntBASIC17.52■□□□□ 0.4
LRRC58Q96CX6 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LRRC58Q96CX6 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRRC58Q96CX6 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.52■□□□□ 0.4
LRRC58Q96CX6 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LRRC58Q96CX6 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LRRC58Q96CX6 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
LRRC58Q96CX6 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LRRC58Q96CX6 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LRRC58Q96CX6 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRRC58Q96CX6 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRRC58Q96CX6 PHGDH-209ENST00000641074 1780 ntBASIC17.51■□□□□ 0.39
LRRC58Q96CX6 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.51■□□□□ 0.39
LRRC58Q96CX6 AC009053.2-201ENST00000563701 2365 ntBASIC17.51■□□□□ 0.39
LRRC58Q96CX6 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRRC58Q96CX6 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRRC58Q96CX6 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
LRRC58Q96CX6 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LRRC58Q96CX6 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRRC58Q96CX6 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRRC58Q96CX6 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRRC58Q96CX6 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRRC58Q96CX6 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRRC58Q96CX6 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LRRC58Q96CX6 AP000593.1-201ENST00000393668 712 ntBASIC17.51■□□□□ 0.39
LRRC58Q96CX6 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.51■□□□□ 0.39
LRRC58Q96CX6 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.51■□□□□ 0.39
LRRC58Q96CX6 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LRRC58Q96CX6 NIFKP9-201ENST00000419265 221 ntBASIC17.51■□□□□ 0.39
LRRC58Q96CX6 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.51■□□□□ 0.39
LRRC58Q96CX6 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LRRC58Q96CX6 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.51■□□□□ 0.39
LRRC58Q96CX6 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LRRC58Q96CX6 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.51■□□□□ 0.39
LRRC58Q96CX6 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.51■□□□□ 0.39
LRRC58Q96CX6 AC233263.1-201ENST00000578059 224 ntBASIC17.51■□□□□ 0.39
LRRC58Q96CX6 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRRC58Q96CX6 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.51■□□□□ 0.39
LRRC58Q96CX6 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
LRRC58Q96CX6 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LRRC58Q96CX6 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRRC58Q96CX6 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRRC58Q96CX6 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms