Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP6V0A1Q93050 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ATP6V0A1Q93050 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.58■□□□□ 0.89
ATP6V0A1Q93050 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ATP6V0A1Q93050 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
ATP6V0A1Q93050 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP6V0A1Q93050 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.58■□□□□ 0.89
ATP6V0A1Q93050 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.58■□□□□ 0.89
ATP6V0A1Q93050 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ATP6V0A1Q93050 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.58■□□□□ 0.89
ATP6V0A1Q93050 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ATP6V0A1Q93050 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
ATP6V0A1Q93050 Z83836.1-201ENST00000624605 1642 ntBASIC20.58■□□□□ 0.89
ATP6V0A1Q93050 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ATP6V0A1Q93050 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP6V0A1Q93050 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP6V0A1Q93050 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
ATP6V0A1Q93050 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP6V0A1Q93050 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.58■□□□□ 0.88
ATP6V0A1Q93050 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.58■□□□□ 0.88
ATP6V0A1Q93050 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.58■□□□□ 0.88
ATP6V0A1Q93050 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
ATP6V0A1Q93050 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ATP6V0A1Q93050 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ATP6V0A1Q93050 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
ATP6V0A1Q93050 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP6V0A1Q93050 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP6V0A1Q93050 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ATP6V0A1Q93050 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP6V0A1Q93050 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP6V0A1Q93050 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP6V0A1Q93050 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP6V0A1Q93050 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.57■□□□□ 0.88
ATP6V0A1Q93050 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.57■□□□□ 0.88
ATP6V0A1Q93050 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
ATP6V0A1Q93050 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ATP6V0A1Q93050 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC20.57■□□□□ 0.88
ATP6V0A1Q93050 NUS1P1-201ENST00000446295 882 ntBASIC20.57■□□□□ 0.88
ATP6V0A1Q93050 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC20.57■□□□□ 0.88
ATP6V0A1Q93050 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ATP6V0A1Q93050 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.57■□□□□ 0.88
ATP6V0A1Q93050 AL499627.1-201ENST00000569373 2188 ntBASIC20.57■□□□□ 0.88
ATP6V0A1Q93050 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ATP6V0A1Q93050 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC20.57■□□□□ 0.88
ATP6V0A1Q93050 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
ATP6V0A1Q93050 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP6V0A1Q93050 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP6V0A1Q93050 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.57■□□□□ 0.88
ATP6V0A1Q93050 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP6V0A1Q93050 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP6V0A1Q93050 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP6V0A1Q93050 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.57■□□□□ 0.88
ATP6V0A1Q93050 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.56■□□□□ 0.88
ATP6V0A1Q93050 AC009102.3-201ENST00000623118 1491 ntBASIC20.56■□□□□ 0.88
ATP6V0A1Q93050 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.56■□□□□ 0.88
ATP6V0A1Q93050 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
ATP6V0A1Q93050 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATP6V0A1Q93050 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.56■□□□□ 0.88
ATP6V0A1Q93050 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP6V0A1Q93050 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATP6V0A1Q93050 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATP6V0A1Q93050 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.56■□□□□ 0.88
ATP6V0A1Q93050 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
ATP6V0A1Q93050 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.56■□□□□ 0.88
ATP6V0A1Q93050 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP6V0A1Q93050 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.56■□□□□ 0.88
ATP6V0A1Q93050 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC20.56■□□□□ 0.88
ATP6V0A1Q93050 AL845331.1-201ENST00000424978 1190 ntBASIC20.56■□□□□ 0.88
ATP6V0A1Q93050 DRAXINP1-201ENST00000437611 948 ntBASIC20.56■□□□□ 0.88
ATP6V0A1Q93050 LINC00265-3P-201ENST00000447588 903 ntBASIC20.56■□□□□ 0.88
ATP6V0A1Q93050 AP003733.1-201ENST00000491725 852 ntBASIC20.56■□□□□ 0.88
ATP6V0A1Q93050 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.56■□□□□ 0.88
ATP6V0A1Q93050 UNC93B7-201ENST00000509439 705 ntBASIC20.56■□□□□ 0.88
ATP6V0A1Q93050 TPSP2-201ENST00000561760 610 ntBASIC20.56■□□□□ 0.88
ATP6V0A1Q93050 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.56■□□□□ 0.88
ATP6V0A1Q93050 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATP6V0A1Q93050 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.56■□□□□ 0.88
ATP6V0A1Q93050 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.56■□□□□ 0.88
ATP6V0A1Q93050 AL031598.1-201ENST00000561511 1773 ntBASIC20.56■□□□□ 0.88
ATP6V0A1Q93050 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
ATP6V0A1Q93050 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP6V0A1Q93050 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.56■□□□□ 0.88
ATP6V0A1Q93050 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP6V0A1Q93050 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATP6V0A1Q93050 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP6V0A1Q93050 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP6V0A1Q93050 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATP6V0A1Q93050 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATP6V0A1Q93050 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP6V0A1Q93050 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.55■□□□□ 0.88
ATP6V0A1Q93050 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATP6V0A1Q93050 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP6V0A1Q93050 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATP6V0A1Q93050 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.55■□□□□ 0.88
ATP6V0A1Q93050 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.55■□□□□ 0.88
ATP6V0A1Q93050 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATP6V0A1Q93050 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.55■□□□□ 0.88
ATP6V0A1Q93050 AP000867.3-201ENST00000524675 377 ntBASIC20.55■□□□□ 0.88
ATP6V0A1Q93050 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.55■□□□□ 0.88
ATP6V0A1Q93050 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms