Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC7.41□□□□□ -1.22
SYNE2Q8WXH0 ADH5P3-201ENST00000433842 1137 ntBASIC7.41□□□□□ -1.22
SYNE2Q8WXH0 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC7.41□□□□□ -1.22
SYNE2Q8WXH0 MFF-223ENST00000524634 647 ntTSL 2 BASIC7.41□□□□□ -1.22
SYNE2Q8WXH0 KRT8P23-201ENST00000560090 1207 ntBASIC7.41□□□□□ -1.22
SYNE2Q8WXH0 AC128714.1-201ENST00000637035 887 ntBASIC7.41□□□□□ -1.22
SYNE2Q8WXH0 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SYNE2Q8WXH0 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SYNE2Q8WXH0 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC7.4□□□□□ -1.22
SYNE2Q8WXH0 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC7.4□□□□□ -1.22
SYNE2Q8WXH0 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC7.4□□□□□ -1.22
SYNE2Q8WXH0 IGHV3-42-201ENST00000520410 361 ntBASIC7.4□□□□□ -1.22
SYNE2Q8WXH0 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC7.4□□□□□ -1.22
SYNE2Q8WXH0 POLD4-207ENST00000531239 584 ntTSL 2 BASIC7.4□□□□□ -1.22
SYNE2Q8WXH0 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC7.4□□□□□ -1.22
SYNE2Q8WXH0 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC7.4□□□□□ -1.22
SYNE2Q8WXH0 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC7.4□□□□□ -1.22
SYNE2Q8WXH0 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC7.4□□□□□ -1.22
SYNE2Q8WXH0 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
SYNE2Q8WXH0 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
SYNE2Q8WXH0 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
SYNE2Q8WXH0 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
SYNE2Q8WXH0 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
SYNE2Q8WXH0 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC7.4□□□□□ -1.22
SYNE2Q8WXH0 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC7.4□□□□□ -1.22
SYNE2Q8WXH0 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC7.4□□□□□ -1.22
SYNE2Q8WXH0 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC7.4□□□□□ -1.22
SYNE2Q8WXH0 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
SYNE2Q8WXH0 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
SYNE2Q8WXH0 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
SYNE2Q8WXH0 AC099343.3-201ENST00000605834 2503 ntBASIC7.4□□□□□ -1.22
SYNE2Q8WXH0 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
SYNE2Q8WXH0 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC7.4□□□□□ -1.22
SYNE2Q8WXH0 MCCD1P1-208ENST00000445732 328 ntBASIC7.4□□□□□ -1.22
SYNE2Q8WXH0 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC7.4□□□□□ -1.22
SYNE2Q8WXH0 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC7.4□□□□□ -1.22
SYNE2Q8WXH0 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC7.4□□□□□ -1.22
SYNE2Q8WXH0 AC244093.1-201ENST00000610837 814 ntBASIC7.4□□□□□ -1.22
SYNE2Q8WXH0 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
SYNE2Q8WXH0 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC7.4□□□□□ -1.22
SYNE2Q8WXH0 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SYNE2Q8WXH0 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
SYNE2Q8WXH0 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
SYNE2Q8WXH0 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
SYNE2Q8WXH0 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
SYNE2Q8WXH0 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
SYNE2Q8WXH0 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
SYNE2Q8WXH0 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC7.4□□□□□ -1.23
SYNE2Q8WXH0 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC7.4□□□□□ -1.23
SYNE2Q8WXH0 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC7.4□□□□□ -1.23
SYNE2Q8WXH0 COX11-210ENST00000639671 696 ntBASIC7.4□□□□□ -1.23
SYNE2Q8WXH0 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC7.4□□□□□ -1.23
SYNE2Q8WXH0 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
SYNE2Q8WXH0 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC7.4□□□□□ -1.23
SYNE2Q8WXH0 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
SYNE2Q8WXH0 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
SYNE2Q8WXH0 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
SYNE2Q8WXH0 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC7.4□□□□□ -1.23
SYNE2Q8WXH0 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
SYNE2Q8WXH0 MXI1-205ENST00000393134 889 ntTSL 2 BASIC7.4□□□□□ -1.23
SYNE2Q8WXH0 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC7.4□□□□□ -1.23
SYNE2Q8WXH0 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC7.4□□□□□ -1.23
SYNE2Q8WXH0 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC7.4□□□□□ -1.23
SYNE2Q8WXH0 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
SYNE2Q8WXH0 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
SYNE2Q8WXH0 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC7.4□□□□□ -1.23
SYNE2Q8WXH0 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC7.4□□□□□ -1.23
SYNE2Q8WXH0 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 MPRIPP1-201ENST00000452433 1089 ntBASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 AP005482.1-201ENST00000563722 1273 ntBASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 TTTY23B-201ENST00000442790 549 ntBASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 AC136632.2-201ENST00000512891 861 ntBASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 LY6E-204ENST00000519546 971 ntTSL 2 BASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 FUZ-207ENST00000526575 482 ntTSL 4 BASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 SPCS2P2-201ENST00000603270 608 ntBASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 MIR2861-201ENST00000636310 90 ntBASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms