Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ATL1Q8WXF7 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.98■□□□□ 0.47
ATL1Q8WXF7 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATL1Q8WXF7 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
ATL1Q8WXF7 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATL1Q8WXF7 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATL1Q8WXF7 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATL1Q8WXF7 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATL1Q8WXF7 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATL1Q8WXF7 AC087499.1-201ENST00000418141 1075 ntBASIC17.98■□□□□ 0.47
ATL1Q8WXF7 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.98■□□□□ 0.47
ATL1Q8WXF7 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.98■□□□□ 0.47
ATL1Q8WXF7 MIR3180-4-201ENST00000582223 153 ntBASIC17.98■□□□□ 0.47
ATL1Q8WXF7 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.98■□□□□ 0.47
ATL1Q8WXF7 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
ATL1Q8WXF7 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ATL1Q8WXF7 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATL1Q8WXF7 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.98■□□□□ 0.47
ATL1Q8WXF7 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATL1Q8WXF7 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATL1Q8WXF7 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATL1Q8WXF7 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATL1Q8WXF7 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATL1Q8WXF7 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATL1Q8WXF7 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
ATL1Q8WXF7 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.98■□□□□ 0.47
ATL1Q8WXF7 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.98■□□□□ 0.47
ATL1Q8WXF7 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATL1Q8WXF7 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.98■□□□□ 0.47
ATL1Q8WXF7 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
ATL1Q8WXF7 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ATL1Q8WXF7 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.97■□□□□ 0.47
ATL1Q8WXF7 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.97■□□□□ 0.47
ATL1Q8WXF7 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
ATL1Q8WXF7 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
ATL1Q8WXF7 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ATL1Q8WXF7 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATL1Q8WXF7 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ATL1Q8WXF7 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATL1Q8WXF7 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ATL1Q8WXF7 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATL1Q8WXF7 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ATL1Q8WXF7 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATL1Q8WXF7 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATL1Q8WXF7 AP000523.1-201ENST00000398242 1049 ntBASIC17.97■□□□□ 0.47
ATL1Q8WXF7 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ATL1Q8WXF7 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
ATL1Q8WXF7 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.97■□□□□ 0.47
ATL1Q8WXF7 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.97■□□□□ 0.47
ATL1Q8WXF7 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
ATL1Q8WXF7 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
ATL1Q8WXF7 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.97■□□□□ 0.47
ATL1Q8WXF7 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.97■□□□□ 0.47
ATL1Q8WXF7 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.97■□□□□ 0.47
ATL1Q8WXF7 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ATL1Q8WXF7 AC145285.6-201ENST00000604632 637 ntBASIC17.97■□□□□ 0.47
ATL1Q8WXF7 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATL1Q8WXF7 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
ATL1Q8WXF7 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATL1Q8WXF7 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
ATL1Q8WXF7 AL163051.1-201ENST00000569214 1512 ntBASIC17.97■□□□□ 0.47
ATL1Q8WXF7 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.97■□□□□ 0.47
ATL1Q8WXF7 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATL1Q8WXF7 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATL1Q8WXF7 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATL1Q8WXF7 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.97■□□□□ 0.47
ATL1Q8WXF7 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATL1Q8WXF7 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
ATL1Q8WXF7 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
ATL1Q8WXF7 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATL1Q8WXF7 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.96■□□□□ 0.47
ATL1Q8WXF7 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ATL1Q8WXF7 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.96■□□□□ 0.47
ATL1Q8WXF7 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ATL1Q8WXF7 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
ATL1Q8WXF7 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
ATL1Q8WXF7 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.96■□□□□ 0.47
ATL1Q8WXF7 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.96■□□□□ 0.47
ATL1Q8WXF7 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATL1Q8WXF7 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
ATL1Q8WXF7 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.96■□□□□ 0.47
ATL1Q8WXF7 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.96■□□□□ 0.47
ATL1Q8WXF7 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.96■□□□□ 0.47
ATL1Q8WXF7 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.96■□□□□ 0.47
ATL1Q8WXF7 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ATL1Q8WXF7 AC104390.1-201ENST00000555663 520 ntBASIC17.96■□□□□ 0.47
ATL1Q8WXF7 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.96■□□□□ 0.47
ATL1Q8WXF7 NEK4P2-201ENST00000580004 1012 ntBASIC17.96■□□□□ 0.47
ATL1Q8WXF7 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.96■□□□□ 0.47
ATL1Q8WXF7 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
ATL1Q8WXF7 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
ATL1Q8WXF7 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
ATL1Q8WXF7 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.96■□□□□ 0.47
ATL1Q8WXF7 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
ATL1Q8WXF7 FZD10-202ENST00000539839 3282 ntBASIC17.96■□□□□ 0.47
ATL1Q8WXF7 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ATL1Q8WXF7 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATL1Q8WXF7 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATL1Q8WXF7 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ATL1Q8WXF7 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms