Protein–RNA interactions for Protein: Q8WW43

APH1B, Gamma-secretase subunit APH-1B, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1BQ8WW43 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
APH1BQ8WW43 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
APH1BQ8WW43 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
APH1BQ8WW43 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
APH1BQ8WW43 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
APH1BQ8WW43 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
APH1BQ8WW43 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
APH1BQ8WW43 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
APH1BQ8WW43 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
APH1BQ8WW43 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
APH1BQ8WW43 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
APH1BQ8WW43 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
APH1BQ8WW43 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
APH1BQ8WW43 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.66■□□□□ 0.26
APH1BQ8WW43 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
APH1BQ8WW43 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.66■□□□□ 0.26
APH1BQ8WW43 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
APH1BQ8WW43 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
APH1BQ8WW43 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
APH1BQ8WW43 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.66■□□□□ 0.26
APH1BQ8WW43 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC16.66■□□□□ 0.26
APH1BQ8WW43 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.66■□□□□ 0.26
APH1BQ8WW43 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC16.66■□□□□ 0.26
APH1BQ8WW43 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
APH1BQ8WW43 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
APH1BQ8WW43 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
APH1BQ8WW43 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
APH1BQ8WW43 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
APH1BQ8WW43 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
APH1BQ8WW43 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
APH1BQ8WW43 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
APH1BQ8WW43 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
APH1BQ8WW43 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
APH1BQ8WW43 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.65■□□□□ 0.26
APH1BQ8WW43 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
APH1BQ8WW43 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.65■□□□□ 0.26
APH1BQ8WW43 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
APH1BQ8WW43 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
APH1BQ8WW43 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
APH1BQ8WW43 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC16.65■□□□□ 0.26
APH1BQ8WW43 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.65■□□□□ 0.26
APH1BQ8WW43 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
APH1BQ8WW43 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
APH1BQ8WW43 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.65■□□□□ 0.26
APH1BQ8WW43 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC16.65■□□□□ 0.26
APH1BQ8WW43 PRSS44-201ENST00000515154 1146 ntBASIC16.65■□□□□ 0.26
APH1BQ8WW43 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
APH1BQ8WW43 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC16.65■□□□□ 0.26
APH1BQ8WW43 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
APH1BQ8WW43 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
APH1BQ8WW43 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
APH1BQ8WW43 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.65■□□□□ 0.26
APH1BQ8WW43 NBPF21P-201ENST00000425093 1451 ntBASIC16.65■□□□□ 0.26
APH1BQ8WW43 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.65■□□□□ 0.26
APH1BQ8WW43 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
APH1BQ8WW43 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
APH1BQ8WW43 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.65■□□□□ 0.26
APH1BQ8WW43 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
APH1BQ8WW43 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
APH1BQ8WW43 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
APH1BQ8WW43 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
APH1BQ8WW43 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
APH1BQ8WW43 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
APH1BQ8WW43 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
APH1BQ8WW43 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
APH1BQ8WW43 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.64■□□□□ 0.25
APH1BQ8WW43 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
APH1BQ8WW43 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
APH1BQ8WW43 CROCCP5-201ENST00000436658 830 ntBASIC16.64■□□□□ 0.25
APH1BQ8WW43 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC16.64■□□□□ 0.25
APH1BQ8WW43 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.64■□□□□ 0.25
APH1BQ8WW43 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
APH1BQ8WW43 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC16.64■□□□□ 0.25
APH1BQ8WW43 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.64■□□□□ 0.25
APH1BQ8WW43 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC16.64■□□□□ 0.25
APH1BQ8WW43 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC16.64■□□□□ 0.25
APH1BQ8WW43 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.64■□□□□ 0.25
APH1BQ8WW43 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
APH1BQ8WW43 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
APH1BQ8WW43 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
APH1BQ8WW43 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
APH1BQ8WW43 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
APH1BQ8WW43 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
APH1BQ8WW43 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.64■□□□□ 0.25
APH1BQ8WW43 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
APH1BQ8WW43 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
APH1BQ8WW43 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
APH1BQ8WW43 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
APH1BQ8WW43 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
APH1BQ8WW43 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
APH1BQ8WW43 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
APH1BQ8WW43 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
APH1BQ8WW43 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
APH1BQ8WW43 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
APH1BQ8WW43 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
APH1BQ8WW43 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
APH1BQ8WW43 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
APH1BQ8WW43 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
APH1BQ8WW43 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
APH1BQ8WW43 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms