Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RNF138Q8WVD3 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.6■□□□□ 0.25
RNF138Q8WVD3 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
RNF138Q8WVD3 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF138Q8WVD3 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF138Q8WVD3 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.6■□□□□ 0.25
RNF138Q8WVD3 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF138Q8WVD3 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RNF138Q8WVD3 AC132938.6-201ENST00000623828 1655 ntBASIC16.6■□□□□ 0.25
RNF138Q8WVD3 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF138Q8WVD3 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF138Q8WVD3 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF138Q8WVD3 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF138Q8WVD3 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF138Q8WVD3 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.6■□□□□ 0.25
RNF138Q8WVD3 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF138Q8WVD3 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF138Q8WVD3 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
RNF138Q8WVD3 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF138Q8WVD3 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.6■□□□□ 0.25
RNF138Q8WVD3 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.6■□□□□ 0.25
RNF138Q8WVD3 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.6■□□□□ 0.25
RNF138Q8WVD3 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF138Q8WVD3 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
RNF138Q8WVD3 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF138Q8WVD3 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.6■□□□□ 0.25
RNF138Q8WVD3 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.6■□□□□ 0.25
RNF138Q8WVD3 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF138Q8WVD3 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF138Q8WVD3 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF138Q8WVD3 AC135776.1-201ENST00000319817 2481 ntBASIC16.6■□□□□ 0.25
RNF138Q8WVD3 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF138Q8WVD3 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF138Q8WVD3 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RNF138Q8WVD3 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF138Q8WVD3 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF138Q8WVD3 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF138Q8WVD3 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF138Q8WVD3 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
RNF138Q8WVD3 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF138Q8WVD3 Z83836.1-201ENST00000624605 1642 ntBASIC16.59■□□□□ 0.25
RNF138Q8WVD3 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF138Q8WVD3 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF138Q8WVD3 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF138Q8WVD3 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF138Q8WVD3 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RNF138Q8WVD3 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF138Q8WVD3 KRT8P26-201ENST00000534154 1276 ntBASIC16.59■□□□□ 0.25
RNF138Q8WVD3 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF138Q8WVD3 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF138Q8WVD3 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF138Q8WVD3 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF138Q8WVD3 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF138Q8WVD3 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF138Q8WVD3 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF138Q8WVD3 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF138Q8WVD3 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF138Q8WVD3 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF138Q8WVD3 AL353692.3-201ENST00000407031 1396 ntBASIC16.59■□□□□ 0.25
RNF138Q8WVD3 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF138Q8WVD3 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF138Q8WVD3 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RNF138Q8WVD3 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF138Q8WVD3 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF138Q8WVD3 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF138Q8WVD3 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
RNF138Q8WVD3 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RNF138Q8WVD3 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.25
RNF138Q8WVD3 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF138Q8WVD3 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF138Q8WVD3 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF138Q8WVD3 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF138Q8WVD3 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
RNF138Q8WVD3 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.58■□□□□ 0.24
RNF138Q8WVD3 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.58■□□□□ 0.24
RNF138Q8WVD3 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF138Q8WVD3 DUTP2-201ENST00000519164 463 ntBASIC16.58■□□□□ 0.24
RNF138Q8WVD3 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.58■□□□□ 0.24
RNF138Q8WVD3 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.58■□□□□ 0.24
RNF138Q8WVD3 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.58■□□□□ 0.24
RNF138Q8WVD3 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.58■□□□□ 0.24
RNF138Q8WVD3 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.58■□□□□ 0.24
RNF138Q8WVD3 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RNF138Q8WVD3 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF138Q8WVD3 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF138Q8WVD3 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
RNF138Q8WVD3 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RNF138Q8WVD3 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.58■□□□□ 0.24
RNF138Q8WVD3 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.58■□□□□ 0.24
RNF138Q8WVD3 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF138Q8WVD3 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF138Q8WVD3 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RNF138Q8WVD3 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF138Q8WVD3 AC104581.1-202ENST00000635932 2618 ntBASIC16.57■□□□□ 0.24
RNF138Q8WVD3 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF138Q8WVD3 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF138Q8WVD3 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF138Q8WVD3 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF138Q8WVD3 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF138Q8WVD3 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms