Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTCD2Q8WV60 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTCD2Q8WV60 KRTAP4-4-201ENST00000390661 1081 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
PTCD2Q8WV60 BX664615.1-201ENST00000443558 458 ntBASIC18.64■□□□□ 0.57
PTCD2Q8WV60 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.64■□□□□ 0.57
PTCD2Q8WV60 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.64■□□□□ 0.57
PTCD2Q8WV60 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.64■□□□□ 0.57
PTCD2Q8WV60 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.64■□□□□ 0.57
PTCD2Q8WV60 AL023973.1-201ENST00000624619 620 ntBASIC18.64■□□□□ 0.57
PTCD2Q8WV60 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTCD2Q8WV60 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
PTCD2Q8WV60 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PTCD2Q8WV60 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTCD2Q8WV60 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTCD2Q8WV60 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PTCD2Q8WV60 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.63■□□□□ 0.57
PTCD2Q8WV60 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTCD2Q8WV60 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTCD2Q8WV60 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTCD2Q8WV60 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
PTCD2Q8WV60 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.63■□□□□ 0.57
PTCD2Q8WV60 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTCD2Q8WV60 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTCD2Q8WV60 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.63■□□□□ 0.57
PTCD2Q8WV60 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.63■□□□□ 0.57
PTCD2Q8WV60 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTCD2Q8WV60 AK4P3-201ENST00000418260 669 ntBASIC18.63■□□□□ 0.57
PTCD2Q8WV60 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
PTCD2Q8WV60 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTCD2Q8WV60 YBX1P2-201ENST00000489612 999 ntBASIC18.63■□□□□ 0.57
PTCD2Q8WV60 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.63■□□□□ 0.57
PTCD2Q8WV60 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.63■□□□□ 0.57
PTCD2Q8WV60 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.63■□□□□ 0.57
PTCD2Q8WV60 NTF6B-201ENST00000591913 560 ntBASIC18.63■□□□□ 0.57
PTCD2Q8WV60 AC092068.1-201ENST00000592525 454 ntTSL 2 BASIC18.63■□□□□ 0.57
PTCD2Q8WV60 AC011558.1-201ENST00000623459 338 ntBASIC18.63■□□□□ 0.57
PTCD2Q8WV60 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTCD2Q8WV60 KRT8P50-201ENST00000562022 1438 ntBASIC18.63■□□□□ 0.57
PTCD2Q8WV60 HOXB1-202ENST00000577092 1414 ntBASIC18.63■□□□□ 0.57
PTCD2Q8WV60 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTCD2Q8WV60 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.63■□□□□ 0.57
PTCD2Q8WV60 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTCD2Q8WV60 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTCD2Q8WV60 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.63■□□□□ 0.57
PTCD2Q8WV60 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTCD2Q8WV60 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTCD2Q8WV60 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PTCD2Q8WV60 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTCD2Q8WV60 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTCD2Q8WV60 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTCD2Q8WV60 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTCD2Q8WV60 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTCD2Q8WV60 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
PTCD2Q8WV60 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.62■□□□□ 0.57
PTCD2Q8WV60 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTCD2Q8WV60 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTCD2Q8WV60 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTCD2Q8WV60 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTCD2Q8WV60 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTCD2Q8WV60 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTCD2Q8WV60 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTCD2Q8WV60 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
PTCD2Q8WV60 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTCD2Q8WV60 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTCD2Q8WV60 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.62■□□□□ 0.57
PTCD2Q8WV60 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.62■□□□□ 0.57
PTCD2Q8WV60 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.62■□□□□ 0.57
PTCD2Q8WV60 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTCD2Q8WV60 CR769767.2-201ENST00000622735 460 ntBASIC18.62■□□□□ 0.57
PTCD2Q8WV60 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
PTCD2Q8WV60 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PTCD2Q8WV60 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTCD2Q8WV60 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.62■□□□□ 0.57
PTCD2Q8WV60 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTCD2Q8WV60 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.62■□□□□ 0.57
PTCD2Q8WV60 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTCD2Q8WV60 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTCD2Q8WV60 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.62■□□□□ 0.57
PTCD2Q8WV60 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.62■□□□□ 0.57
PTCD2Q8WV60 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTCD2Q8WV60 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTCD2Q8WV60 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PTCD2Q8WV60 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTCD2Q8WV60 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.61■□□□□ 0.57
PTCD2Q8WV60 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
PTCD2Q8WV60 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTCD2Q8WV60 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PTCD2Q8WV60 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTCD2Q8WV60 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTCD2Q8WV60 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.61■□□□□ 0.57
PTCD2Q8WV60 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTCD2Q8WV60 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTCD2Q8WV60 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.61■□□□□ 0.57
PTCD2Q8WV60 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTCD2Q8WV60 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.61■□□□□ 0.57
PTCD2Q8WV60 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTCD2Q8WV60 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTCD2Q8WV60 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTCD2Q8WV60 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTCD2Q8WV60 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms