Protein–RNA interactions for Protein: Q8TC12

RDH11, Retinol dehydrogenase 11, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11Q8TC12 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RDH11Q8TC12 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.14■□□□□ 0.49
RDH11Q8TC12 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
RDH11Q8TC12 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RDH11Q8TC12 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RDH11Q8TC12 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RDH11Q8TC12 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RDH11Q8TC12 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RDH11Q8TC12 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RDH11Q8TC12 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RDH11Q8TC12 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.13■□□□□ 0.49
RDH11Q8TC12 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.13■□□□□ 0.49
RDH11Q8TC12 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RDH11Q8TC12 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
RDH11Q8TC12 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RDH11Q8TC12 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.13■□□□□ 0.49
RDH11Q8TC12 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RDH11Q8TC12 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RDH11Q8TC12 PHGDH-209ENST00000641074 1780 ntBASIC18.13■□□□□ 0.49
RDH11Q8TC12 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.13■□□□□ 0.49
RDH11Q8TC12 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RDH11Q8TC12 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RDH11Q8TC12 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.13■□□□□ 0.49
RDH11Q8TC12 AL158047.1-201ENST00000445918 881 ntBASIC18.13■□□□□ 0.49
RDH11Q8TC12 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RDH11Q8TC12 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.13■□□□□ 0.49
RDH11Q8TC12 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.13■□□□□ 0.49
RDH11Q8TC12 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.13■□□□□ 0.49
RDH11Q8TC12 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RDH11Q8TC12 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
RDH11Q8TC12 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RDH11Q8TC12 AC096733.2-201ENST00000609937 1394 ntBASIC18.13■□□□□ 0.49
RDH11Q8TC12 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.13■□□□□ 0.49
RDH11Q8TC12 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RDH11Q8TC12 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RDH11Q8TC12 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RDH11Q8TC12 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RDH11Q8TC12 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
RDH11Q8TC12 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
RDH11Q8TC12 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RDH11Q8TC12 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.12■□□□□ 0.49
RDH11Q8TC12 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RDH11Q8TC12 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RDH11Q8TC12 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RDH11Q8TC12 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RDH11Q8TC12 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
RDH11Q8TC12 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
RDH11Q8TC12 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.12■□□□□ 0.49
RDH11Q8TC12 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
RDH11Q8TC12 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RDH11Q8TC12 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.12■□□□□ 0.49
RDH11Q8TC12 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RDH11Q8TC12 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RDH11Q8TC12 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.12■□□□□ 0.49
RDH11Q8TC12 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.12■□□□□ 0.49
RDH11Q8TC12 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RDH11Q8TC12 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.12■□□□□ 0.49
RDH11Q8TC12 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.12■□□□□ 0.49
RDH11Q8TC12 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.12■□□□□ 0.49
RDH11Q8TC12 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RDH11Q8TC12 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RDH11Q8TC12 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.12■□□□□ 0.49
RDH11Q8TC12 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
RDH11Q8TC12 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.11■□□□□ 0.49
RDH11Q8TC12 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RDH11Q8TC12 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RDH11Q8TC12 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RDH11Q8TC12 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
RDH11Q8TC12 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.11■□□□□ 0.49
RDH11Q8TC12 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RDH11Q8TC12 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.11■□□□□ 0.49
RDH11Q8TC12 C1QBPP2-201ENST00000528754 825 ntBASIC18.11■□□□□ 0.49
RDH11Q8TC12 AC142381.4-202ENST00000563973 229 ntBASIC18.11■□□□□ 0.49
RDH11Q8TC12 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.11■□□□□ 0.49
RDH11Q8TC12 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.11■□□□□ 0.49
RDH11Q8TC12 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RDH11Q8TC12 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RDH11Q8TC12 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RDH11Q8TC12 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RDH11Q8TC12 GPAT2P1-201ENST00000444924 1672 ntBASIC18.11■□□□□ 0.49
RDH11Q8TC12 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RDH11Q8TC12 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.11■□□□□ 0.49
RDH11Q8TC12 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RDH11Q8TC12 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RDH11Q8TC12 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RDH11Q8TC12 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RDH11Q8TC12 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RDH11Q8TC12 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RDH11Q8TC12 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.11■□□□□ 0.49
RDH11Q8TC12 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
RDH11Q8TC12 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RDH11Q8TC12 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RDH11Q8TC12 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.1■□□□□ 0.49
RDH11Q8TC12 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
RDH11Q8TC12 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RDH11Q8TC12 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RDH11Q8TC12 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
RDH11Q8TC12 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RDH11Q8TC12 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RDH11Q8TC12 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms