Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
PCDH19Q8TAB3 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.02■□□□□ 0.63
PCDH19Q8TAB3 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
PCDH19Q8TAB3 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH19Q8TAB3 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH19Q8TAB3 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH19Q8TAB3 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH19Q8TAB3 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDH19Q8TAB3 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDH19Q8TAB3 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDH19Q8TAB3 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
PCDH19Q8TAB3 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH19Q8TAB3 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDH19Q8TAB3 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH19Q8TAB3 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDH19Q8TAB3 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDH19Q8TAB3 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDH19Q8TAB3 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH19Q8TAB3 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDH19Q8TAB3 MIR149-201ENST00000384879 89 ntBASIC19.01■□□□□ 0.63
PCDH19Q8TAB3 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH19Q8TAB3 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.01■□□□□ 0.63
PCDH19Q8TAB3 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.01■□□□□ 0.63
PCDH19Q8TAB3 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH19Q8TAB3 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH19Q8TAB3 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH19Q8TAB3 AC009102.3-201ENST00000623118 1491 ntBASIC19.01■□□□□ 0.63
PCDH19Q8TAB3 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
PCDH19Q8TAB3 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
PCDH19Q8TAB3 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.01■□□□□ 0.63
PCDH19Q8TAB3 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.01■□□□□ 0.63
PCDH19Q8TAB3 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
PCDH19Q8TAB3 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PCDH19Q8TAB3 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19■□□□□ 0.63
PCDH19Q8TAB3 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PCDH19Q8TAB3 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PCDH19Q8TAB3 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDH19Q8TAB3 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PCDH19Q8TAB3 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19■□□□□ 0.63
PCDH19Q8TAB3 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19■□□□□ 0.63
PCDH19Q8TAB3 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDH19Q8TAB3 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDH19Q8TAB3 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19■□□□□ 0.63
PCDH19Q8TAB3 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19■□□□□ 0.63
PCDH19Q8TAB3 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDH19Q8TAB3 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
PCDH19Q8TAB3 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDH19Q8TAB3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19■□□□□ 0.63
PCDH19Q8TAB3 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PCDH19Q8TAB3 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDH19Q8TAB3 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PCDH19Q8TAB3 AL137013.1-201ENST00000432946 1228 ntBASIC19■□□□□ 0.63
PCDH19Q8TAB3 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDH19Q8TAB3 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDH19Q8TAB3 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19■□□□□ 0.63
PCDH19Q8TAB3 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19■□□□□ 0.63
PCDH19Q8TAB3 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19■□□□□ 0.63
PCDH19Q8TAB3 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19■□□□□ 0.63
PCDH19Q8TAB3 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19■□□□□ 0.63
PCDH19Q8TAB3 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDH19Q8TAB3 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19■□□□□ 0.63
PCDH19Q8TAB3 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19■□□□□ 0.63
PCDH19Q8TAB3 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
PCDH19Q8TAB3 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDH19Q8TAB3 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19■□□□□ 0.63
PCDH19Q8TAB3 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDH19Q8TAB3 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
PCDH19Q8TAB3 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PCDH19Q8TAB3 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDH19Q8TAB3 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
PCDH19Q8TAB3 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDH19Q8TAB3 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDH19Q8TAB3 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19■□□□□ 0.63
PCDH19Q8TAB3 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH19Q8TAB3 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH19Q8TAB3 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH19Q8TAB3 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH19Q8TAB3 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH19Q8TAB3 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.99■□□□□ 0.63
PCDH19Q8TAB3 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH19Q8TAB3 GMCL1P1-201ENST00000463439 1581 ntBASIC18.99■□□□□ 0.63
PCDH19Q8TAB3 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH19Q8TAB3 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH19Q8TAB3 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH19Q8TAB3 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH19Q8TAB3 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH19Q8TAB3 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH19Q8TAB3 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.99■□□□□ 0.63
PCDH19Q8TAB3 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH19Q8TAB3 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH19Q8TAB3 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
PCDH19Q8TAB3 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH19Q8TAB3 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.99■□□□□ 0.63
PCDH19Q8TAB3 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH19Q8TAB3 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH19Q8TAB3 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH19Q8TAB3 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH19Q8TAB3 SEC1P-202ENST00000473944 940 ntBASIC18.99■□□□□ 0.63
PCDH19Q8TAB3 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDH19Q8TAB3 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms