Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NUP43Q8NFH3 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
NUP43Q8NFH3 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.24■□□□□ 0.35
NUP43Q8NFH3 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
NUP43Q8NFH3 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.24■□□□□ 0.35
NUP43Q8NFH3 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NUP43Q8NFH3 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NUP43Q8NFH3 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NUP43Q8NFH3 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
NUP43Q8NFH3 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NUP43Q8NFH3 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NUP43Q8NFH3 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.24■□□□□ 0.35
NUP43Q8NFH3 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NUP43Q8NFH3 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NUP43Q8NFH3 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.24■□□□□ 0.35
NUP43Q8NFH3 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NUP43Q8NFH3 ECEL1P2-202ENST00000465689 757 ntBASIC17.24■□□□□ 0.35
NUP43Q8NFH3 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.24■□□□□ 0.35
NUP43Q8NFH3 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NUP43Q8NFH3 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.24■□□□□ 0.35
NUP43Q8NFH3 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.24■□□□□ 0.35
NUP43Q8NFH3 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
NUP43Q8NFH3 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NUP43Q8NFH3 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NUP43Q8NFH3 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
NUP43Q8NFH3 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NUP43Q8NFH3 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NUP43Q8NFH3 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NUP43Q8NFH3 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NUP43Q8NFH3 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NUP43Q8NFH3 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
NUP43Q8NFH3 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NUP43Q8NFH3 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NUP43Q8NFH3 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NUP43Q8NFH3 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NUP43Q8NFH3 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.23■□□□□ 0.35
NUP43Q8NFH3 AC099343.3-201ENST00000605834 2503 ntBASIC17.23■□□□□ 0.35
NUP43Q8NFH3 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NUP43Q8NFH3 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.23■□□□□ 0.35
NUP43Q8NFH3 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NUP43Q8NFH3 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.23■□□□□ 0.35
NUP43Q8NFH3 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.23■□□□□ 0.35
NUP43Q8NFH3 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NUP43Q8NFH3 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NUP43Q8NFH3 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NUP43Q8NFH3 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NUP43Q8NFH3 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
NUP43Q8NFH3 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NUP43Q8NFH3 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.23■□□□□ 0.35
NUP43Q8NFH3 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
NUP43Q8NFH3 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NUP43Q8NFH3 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
NUP43Q8NFH3 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.23■□□□□ 0.35
NUP43Q8NFH3 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NUP43Q8NFH3 AC112497.1-201ENST00000624824 639 ntBASIC17.23■□□□□ 0.35
NUP43Q8NFH3 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.23■□□□□ 0.35
NUP43Q8NFH3 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NUP43Q8NFH3 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NUP43Q8NFH3 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.23■□□□□ 0.35
NUP43Q8NFH3 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NUP43Q8NFH3 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.23■□□□□ 0.35
NUP43Q8NFH3 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NUP43Q8NFH3 ESPNP-201ENST00000270691 2015 ntBASIC17.23■□□□□ 0.35
NUP43Q8NFH3 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NUP43Q8NFH3 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
NUP43Q8NFH3 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NUP43Q8NFH3 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NUP43Q8NFH3 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
NUP43Q8NFH3 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
NUP43Q8NFH3 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
NUP43Q8NFH3 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
NUP43Q8NFH3 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.22■□□□□ 0.35
NUP43Q8NFH3 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.22■□□□□ 0.35
NUP43Q8NFH3 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NUP43Q8NFH3 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.22■□□□□ 0.35
NUP43Q8NFH3 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
NUP43Q8NFH3 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NUP43Q8NFH3 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NUP43Q8NFH3 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NUP43Q8NFH3 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.22■□□□□ 0.35
NUP43Q8NFH3 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NUP43Q8NFH3 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.22■□□□□ 0.35
NUP43Q8NFH3 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.22■□□□□ 0.35
NUP43Q8NFH3 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.22■□□□□ 0.35
NUP43Q8NFH3 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.22■□□□□ 0.35
NUP43Q8NFH3 LINC01568-207ENST00000641790 1380 ntBASIC17.22■□□□□ 0.35
NUP43Q8NFH3 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NUP43Q8NFH3 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
NUP43Q8NFH3 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.22■□□□□ 0.35
NUP43Q8NFH3 AC093677.2-201ENST00000600169 1863 ntBASIC17.22■□□□□ 0.35
NUP43Q8NFH3 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
NUP43Q8NFH3 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NUP43Q8NFH3 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NUP43Q8NFH3 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.22■□□□□ 0.35
NUP43Q8NFH3 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
NUP43Q8NFH3 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NUP43Q8NFH3 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
NUP43Q8NFH3 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.21■□□□□ 0.35
NUP43Q8NFH3 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NUP43Q8NFH3 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms