Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.12■□□□□ 0.17
CPEB3Q8NE35 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.12■□□□□ 0.17
CPEB3Q8NE35 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CPEB3Q8NE35 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.11■□□□□ 0.17
CPEB3Q8NE35 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
CPEB3Q8NE35 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPEB3Q8NE35 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CPEB3Q8NE35 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.11■□□□□ 0.17
CPEB3Q8NE35 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.11■□□□□ 0.17
CPEB3Q8NE35 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPEB3Q8NE35 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CPEB3Q8NE35 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.11■□□□□ 0.17
CPEB3Q8NE35 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPEB3Q8NE35 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPEB3Q8NE35 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CPEB3Q8NE35 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CPEB3Q8NE35 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CPEB3Q8NE35 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPEB3Q8NE35 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CPEB3Q8NE35 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.11■□□□□ 0.17
CPEB3Q8NE35 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.11■□□□□ 0.17
CPEB3Q8NE35 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.11■□□□□ 0.17
CPEB3Q8NE35 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CPEB3Q8NE35 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.11■□□□□ 0.17
CPEB3Q8NE35 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.11■□□□□ 0.17
CPEB3Q8NE35 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPEB3Q8NE35 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.11■□□□□ 0.17
CPEB3Q8NE35 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.11■□□□□ 0.17
CPEB3Q8NE35 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.11■□□□□ 0.17
CPEB3Q8NE35 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CPEB3Q8NE35 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CPEB3Q8NE35 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.11■□□□□ 0.17
CPEB3Q8NE35 AC024243.1-201ENST00000609234 778 ntBASIC16.11■□□□□ 0.17
CPEB3Q8NE35 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPEB3Q8NE35 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPEB3Q8NE35 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPEB3Q8NE35 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPEB3Q8NE35 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CPEB3Q8NE35 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPEB3Q8NE35 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.11■□□□□ 0.17
CPEB3Q8NE35 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPEB3Q8NE35 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPEB3Q8NE35 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CPEB3Q8NE35 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPEB3Q8NE35 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CPEB3Q8NE35 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.11■□□□□ 0.17
CPEB3Q8NE35 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPEB3Q8NE35 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.11■□□□□ 0.17
CPEB3Q8NE35 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CPEB3Q8NE35 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPEB3Q8NE35 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPEB3Q8NE35 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPEB3Q8NE35 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CPEB3Q8NE35 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPEB3Q8NE35 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CPEB3Q8NE35 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPEB3Q8NE35 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPEB3Q8NE35 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.1■□□□□ 0.17
CPEB3Q8NE35 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPEB3Q8NE35 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CPEB3Q8NE35 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CPEB3Q8NE35 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CPEB3Q8NE35 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPEB3Q8NE35 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.1■□□□□ 0.17
CPEB3Q8NE35 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPEB3Q8NE35 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CPEB3Q8NE35 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CPEB3Q8NE35 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPEB3Q8NE35 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.1■□□□□ 0.17
CPEB3Q8NE35 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.1■□□□□ 0.17
CPEB3Q8NE35 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPEB3Q8NE35 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.1■□□□□ 0.17
CPEB3Q8NE35 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.1■□□□□ 0.17
CPEB3Q8NE35 AC104390.1-201ENST00000555663 520 ntBASIC16.1■□□□□ 0.17
CPEB3Q8NE35 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.1■□□□□ 0.17
CPEB3Q8NE35 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.1■□□□□ 0.17
CPEB3Q8NE35 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.1■□□□□ 0.17
CPEB3Q8NE35 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.1■□□□□ 0.17
CPEB3Q8NE35 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPEB3Q8NE35 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CPEB3Q8NE35 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.1■□□□□ 0.17
CPEB3Q8NE35 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPEB3Q8NE35 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPEB3Q8NE35 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.1■□□□□ 0.17
CPEB3Q8NE35 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPEB3Q8NE35 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPEB3Q8NE35 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CPEB3Q8NE35 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPEB3Q8NE35 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPEB3Q8NE35 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CPEB3Q8NE35 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.1■□□□□ 0.17
CPEB3Q8NE35 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.09■□□□□ 0.17
CPEB3Q8NE35 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPEB3Q8NE35 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.09■□□□□ 0.17
CPEB3Q8NE35 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.09■□□□□ 0.17
CPEB3Q8NE35 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.09■□□□□ 0.17
CPEB3Q8NE35 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.09■□□□□ 0.17
CPEB3Q8NE35 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPEB3Q8NE35 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPEB3Q8NE35 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms