Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 NAT14-202ENST00000587400 416 ntTSL 5 BASIC15.33■□□□□ 0.04
CCDC168Q8NDH2 HTR7P1-202ENST00000624664 4411 ntBASIC15.33■□□□□ 0.04
CCDC168Q8NDH2 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC168Q8NDH2 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC15.32■□□□□ 0.04
CCDC168Q8NDH2 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC168Q8NDH2 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC168Q8NDH2 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.32■□□□□ 0.04
CCDC168Q8NDH2 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.32■□□□□ 0.04
CCDC168Q8NDH2 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC168Q8NDH2 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC168Q8NDH2 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC15.32■□□□□ 0.04
CCDC168Q8NDH2 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC168Q8NDH2 AP002414.3-201ENST00000589352 1468 ntBASIC15.32■□□□□ 0.04
CCDC168Q8NDH2 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC168Q8NDH2 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.32■□□□□ 0.04
CCDC168Q8NDH2 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC168Q8NDH2 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
CCDC168Q8NDH2 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.32■□□□□ 0.04
CCDC168Q8NDH2 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC15.32■□□□□ 0.04
CCDC168Q8NDH2 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CCDC168Q8NDH2 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.32■□□□□ 0.04
CCDC168Q8NDH2 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC168Q8NDH2 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.32■□□□□ 0.04
CCDC168Q8NDH2 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC168Q8NDH2 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.32■□□□□ 0.04
CCDC168Q8NDH2 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.32■□□□□ 0.04
CCDC168Q8NDH2 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.31■□□□□ 0.04
CCDC168Q8NDH2 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC168Q8NDH2 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC168Q8NDH2 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC168Q8NDH2 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC168Q8NDH2 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC168Q8NDH2 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC168Q8NDH2 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.31■□□□□ 0.04
CCDC168Q8NDH2 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.31■□□□□ 0.04
CCDC168Q8NDH2 AC007274.1-201ENST00000439805 662 ntBASIC15.31■□□□□ 0.04
CCDC168Q8NDH2 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC168Q8NDH2 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.31■□□□□ 0.04
CCDC168Q8NDH2 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.31■□□□□ 0.04
CCDC168Q8NDH2 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.31■□□□□ 0.04
CCDC168Q8NDH2 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC168Q8NDH2 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC168Q8NDH2 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC168Q8NDH2 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CCDC168Q8NDH2 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC168Q8NDH2 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC168Q8NDH2 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC168Q8NDH2 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC168Q8NDH2 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC168Q8NDH2 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC168Q8NDH2 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC168Q8NDH2 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC15.31■□□□□ 0.04
CCDC168Q8NDH2 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC168Q8NDH2 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC168Q8NDH2 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CCDC168Q8NDH2 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC168Q8NDH2 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CCDC168Q8NDH2 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC168Q8NDH2 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC168Q8NDH2 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC168Q8NDH2 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC168Q8NDH2 AL139400.1-201ENST00000366220 510 ntBASIC15.31■□□□□ 0.04
CCDC168Q8NDH2 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.31■□□□□ 0.04
CCDC168Q8NDH2 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC168Q8NDH2 TSEN15P1-201ENST00000423257 515 ntBASIC15.31■□□□□ 0.04
CCDC168Q8NDH2 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.31■□□□□ 0.04
CCDC168Q8NDH2 PAWRP1-201ENST00000451083 565 ntBASIC15.31■□□□□ 0.04
CCDC168Q8NDH2 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.31■□□□□ 0.04
CCDC168Q8NDH2 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC168Q8NDH2 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.31■□□□□ 0.04
CCDC168Q8NDH2 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CCDC168Q8NDH2 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.31■□□□□ 0.04
CCDC168Q8NDH2 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.31■□□□□ 0.04
CCDC168Q8NDH2 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC168Q8NDH2 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.31■□□□□ 0.04
CCDC168Q8NDH2 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC168Q8NDH2 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.3■□□□□ 0.04
CCDC168Q8NDH2 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC168Q8NDH2 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC168Q8NDH2 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC168Q8NDH2 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC168Q8NDH2 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC168Q8NDH2 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC168Q8NDH2 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.3■□□□□ 0.04
CCDC168Q8NDH2 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC168Q8NDH2 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC168Q8NDH2 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC168Q8NDH2 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC168Q8NDH2 KRT18P27-201ENST00000427733 1299 ntBASIC15.3■□□□□ 0.04
CCDC168Q8NDH2 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.3■□□□□ 0.04
CCDC168Q8NDH2 AC018845.2-201ENST00000568326 409 ntBASIC15.3■□□□□ 0.04
CCDC168Q8NDH2 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CCDC168Q8NDH2 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CCDC168Q8NDH2 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CCDC168Q8NDH2 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC15.3■□□□□ 0.04
CCDC168Q8NDH2 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC168Q8NDH2 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC168Q8NDH2 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC168Q8NDH2 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC168Q8NDH2 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms