Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 GOLGA6L3-201ENST00000507199 1679 ntBASIC15.32■□□□□ 0.04
COMMD1Q8N668 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COMMD1Q8N668 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
COMMD1Q8N668 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COMMD1Q8N668 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
COMMD1Q8N668 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COMMD1Q8N668 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
COMMD1Q8N668 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC15.31■□□□□ 0.04
COMMD1Q8N668 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
COMMD1Q8N668 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COMMD1Q8N668 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.31■□□□□ 0.04
COMMD1Q8N668 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
COMMD1Q8N668 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC15.31■□□□□ 0.04
COMMD1Q8N668 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
COMMD1Q8N668 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC15.31■□□□□ 0.04
COMMD1Q8N668 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC15.31■□□□□ 0.04
COMMD1Q8N668 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC15.31■□□□□ 0.04
COMMD1Q8N668 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.31■□□□□ 0.04
COMMD1Q8N668 SLC25A6P5-201ENST00000435663 894 ntBASIC15.31■□□□□ 0.04
COMMD1Q8N668 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.31■□□□□ 0.04
COMMD1Q8N668 FDX2-207ENST00000494368 584 ntTSL 4 BASIC15.31■□□□□ 0.04
COMMD1Q8N668 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COMMD1Q8N668 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
COMMD1Q8N668 REXO2-216ENST00000544196 452 ntTSL 3 BASIC15.31■□□□□ 0.04
COMMD1Q8N668 SRI-203ENST00000419179 1307 ntTSL 2 BASIC15.31■□□□□ 0.04
COMMD1Q8N668 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
COMMD1Q8N668 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.31■□□□□ 0.04
COMMD1Q8N668 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC15.31■□□□□ 0.04
COMMD1Q8N668 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
COMMD1Q8N668 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COMMD1Q8N668 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC15.31■□□□□ 0.04
COMMD1Q8N668 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
COMMD1Q8N668 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
COMMD1Q8N668 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COMMD1Q8N668 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC15.31■□□□□ 0.04
COMMD1Q8N668 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
COMMD1Q8N668 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC15.31■□□□□ 0.04
COMMD1Q8N668 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
COMMD1Q8N668 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
COMMD1Q8N668 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC15.31■□□□□ 0.04
COMMD1Q8N668 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
COMMD1Q8N668 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COMMD1Q8N668 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
COMMD1Q8N668 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
COMMD1Q8N668 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
COMMD1Q8N668 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COMMD1Q8N668 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
COMMD1Q8N668 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.31■□□□□ 0.04
COMMD1Q8N668 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
COMMD1Q8N668 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD1Q8N668 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD1Q8N668 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD1Q8N668 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD1Q8N668 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD1Q8N668 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD1Q8N668 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD1Q8N668 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD1Q8N668 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD1Q8N668 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD1Q8N668 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
COMMD1Q8N668 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD1Q8N668 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.3■□□□□ 0.04
COMMD1Q8N668 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD1Q8N668 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD1Q8N668 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
COMMD1Q8N668 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC15.3■□□□□ 0.04
COMMD1Q8N668 KRT16P1-201ENST00000399124 1418 ntBASIC15.3■□□□□ 0.04
COMMD1Q8N668 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD1Q8N668 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD1Q8N668 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.3■□□□□ 0.04
COMMD1Q8N668 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD1Q8N668 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.3■□□□□ 0.04
COMMD1Q8N668 PENK-204ENST00000518770 863 ntTSL 2 BASIC15.3■□□□□ 0.04
COMMD1Q8N668 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC15.3■□□□□ 0.04
COMMD1Q8N668 EML3-216ENST00000529309 2909 ntTSL 2 BASIC15.3■□□□□ 0.04
COMMD1Q8N668 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC15.3■□□□□ 0.04
COMMD1Q8N668 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD1Q8N668 AC026471.5-201ENST00000615068 467 ntBASIC15.3■□□□□ 0.04
COMMD1Q8N668 DECR2-212ENST00000627716 352 ntTSL 2 BASIC15.3■□□□□ 0.04
COMMD1Q8N668 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD1Q8N668 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD1Q8N668 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD1Q8N668 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD1Q8N668 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD1Q8N668 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
COMMD1Q8N668 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
COMMD1Q8N668 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC15.29■□□□□ 0.04
COMMD1Q8N668 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC15.29■□□□□ 0.04
COMMD1Q8N668 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COMMD1Q8N668 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COMMD1Q8N668 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
COMMD1Q8N668 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
COMMD1Q8N668 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
COMMD1Q8N668 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
COMMD1Q8N668 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
COMMD1Q8N668 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COMMD1Q8N668 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
COMMD1Q8N668 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
COMMD1Q8N668 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
COMMD1Q8N668 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms