Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BEST3Q8N1M1 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BEST3Q8N1M1 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
BEST3Q8N1M1 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
BEST3Q8N1M1 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
BEST3Q8N1M1 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
BEST3Q8N1M1 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
BEST3Q8N1M1 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
BEST3Q8N1M1 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
BEST3Q8N1M1 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.08■□□□□ 0.33
BEST3Q8N1M1 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
BEST3Q8N1M1 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
BEST3Q8N1M1 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BEST3Q8N1M1 AL162741.1-201ENST00000565563 1558 ntBASIC17.08■□□□□ 0.32
BEST3Q8N1M1 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
BEST3Q8N1M1 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
BEST3Q8N1M1 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BEST3Q8N1M1 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
BEST3Q8N1M1 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.08■□□□□ 0.32
BEST3Q8N1M1 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
BEST3Q8N1M1 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.08■□□□□ 0.32
BEST3Q8N1M1 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.08■□□□□ 0.32
BEST3Q8N1M1 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.08■□□□□ 0.32
BEST3Q8N1M1 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
BEST3Q8N1M1 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.08■□□□□ 0.32
BEST3Q8N1M1 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
BEST3Q8N1M1 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
BEST3Q8N1M1 AL161938.1-201ENST00000569833 2180 ntBASIC17.08■□□□□ 0.32
BEST3Q8N1M1 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BEST3Q8N1M1 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
BEST3Q8N1M1 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.08■□□□□ 0.32
BEST3Q8N1M1 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
BEST3Q8N1M1 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
BEST3Q8N1M1 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
BEST3Q8N1M1 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BEST3Q8N1M1 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BEST3Q8N1M1 HEIH-201ENST00000623091 1652 ntBASIC17.07■□□□□ 0.32
BEST3Q8N1M1 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.07■□□□□ 0.32
BEST3Q8N1M1 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BEST3Q8N1M1 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BEST3Q8N1M1 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
BEST3Q8N1M1 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
BEST3Q8N1M1 KRT18P48-201ENST00000434763 852 ntBASIC17.07■□□□□ 0.32
BEST3Q8N1M1 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.07■□□□□ 0.32
BEST3Q8N1M1 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BEST3Q8N1M1 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.07■□□□□ 0.32
BEST3Q8N1M1 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.07■□□□□ 0.32
BEST3Q8N1M1 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.07■□□□□ 0.32
BEST3Q8N1M1 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
BEST3Q8N1M1 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.07■□□□□ 0.32
BEST3Q8N1M1 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BEST3Q8N1M1 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BEST3Q8N1M1 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BEST3Q8N1M1 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BEST3Q8N1M1 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BEST3Q8N1M1 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.07■□□□□ 0.32
BEST3Q8N1M1 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BEST3Q8N1M1 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
BEST3Q8N1M1 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
BEST3Q8N1M1 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BEST3Q8N1M1 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.07■□□□□ 0.32
BEST3Q8N1M1 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
BEST3Q8N1M1 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
BEST3Q8N1M1 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
BEST3Q8N1M1 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
BEST3Q8N1M1 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.06■□□□□ 0.32
BEST3Q8N1M1 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BEST3Q8N1M1 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BEST3Q8N1M1 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.06■□□□□ 0.32
BEST3Q8N1M1 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BEST3Q8N1M1 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BEST3Q8N1M1 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BEST3Q8N1M1 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
BEST3Q8N1M1 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BEST3Q8N1M1 AL357033.4-201ENST00000617703 1807 ntBASIC17.06■□□□□ 0.32
BEST3Q8N1M1 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BEST3Q8N1M1 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
BEST3Q8N1M1 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.06■□□□□ 0.32
BEST3Q8N1M1 ATP5G2P1-201ENST00000433580 426 ntBASIC17.06■□□□□ 0.32
BEST3Q8N1M1 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
BEST3Q8N1M1 BX276092.5-203ENST00000456199 560 ntBASIC17.06■□□□□ 0.32
BEST3Q8N1M1 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.06■□□□□ 0.32
BEST3Q8N1M1 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.06■□□□□ 0.32
BEST3Q8N1M1 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.06■□□□□ 0.32
BEST3Q8N1M1 Z98044.1-201ENST00000632503 1764 ntBASIC17.06■□□□□ 0.32
BEST3Q8N1M1 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
BEST3Q8N1M1 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
BEST3Q8N1M1 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BEST3Q8N1M1 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BEST3Q8N1M1 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BEST3Q8N1M1 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BEST3Q8N1M1 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
BEST3Q8N1M1 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BEST3Q8N1M1 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.05■□□□□ 0.32
BEST3Q8N1M1 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
BEST3Q8N1M1 AL049812.1-201ENST00000432563 2267 ntBASIC17.05■□□□□ 0.32
BEST3Q8N1M1 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BEST3Q8N1M1 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BEST3Q8N1M1 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BEST3Q8N1M1 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms