Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF440Q8IYI8 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF440Q8IYI8 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF440Q8IYI8 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF440Q8IYI8 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF440Q8IYI8 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF440Q8IYI8 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF440Q8IYI8 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF440Q8IYI8 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF440Q8IYI8 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF440Q8IYI8 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF440Q8IYI8 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.84■□□□□ 0.29
ZNF440Q8IYI8 AC093677.2-201ENST00000600169 1863 ntBASIC16.84■□□□□ 0.29
ZNF440Q8IYI8 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF440Q8IYI8 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
ZNF440Q8IYI8 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
ZNF440Q8IYI8 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF440Q8IYI8 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF440Q8IYI8 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.84■□□□□ 0.29
ZNF440Q8IYI8 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF440Q8IYI8 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ZNF440Q8IYI8 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ZNF440Q8IYI8 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF440Q8IYI8 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF440Q8IYI8 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF440Q8IYI8 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF440Q8IYI8 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF440Q8IYI8 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.83■□□□□ 0.28
ZNF440Q8IYI8 KRT18P22-201ENST00000402024 1347 ntBASIC16.83■□□□□ 0.28
ZNF440Q8IYI8 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.83■□□□□ 0.28
ZNF440Q8IYI8 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF440Q8IYI8 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
ZNF440Q8IYI8 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
ZNF440Q8IYI8 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.83■□□□□ 0.28
ZNF440Q8IYI8 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF440Q8IYI8 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.83■□□□□ 0.28
ZNF440Q8IYI8 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.83■□□□□ 0.28
ZNF440Q8IYI8 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.83■□□□□ 0.28
ZNF440Q8IYI8 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.83■□□□□ 0.28
ZNF440Q8IYI8 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.83■□□□□ 0.28
ZNF440Q8IYI8 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.83■□□□□ 0.28
ZNF440Q8IYI8 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF440Q8IYI8 NEK4P2-201ENST00000580004 1012 ntBASIC16.83■□□□□ 0.28
ZNF440Q8IYI8 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.83■□□□□ 0.28
ZNF440Q8IYI8 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF440Q8IYI8 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF440Q8IYI8 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
ZNF440Q8IYI8 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF440Q8IYI8 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF440Q8IYI8 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
ZNF440Q8IYI8 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
ZNF440Q8IYI8 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.83■□□□□ 0.28
ZNF440Q8IYI8 AC066615.1-201ENST00000640911 628 ntBASIC16.83■□□□□ 0.28
ZNF440Q8IYI8 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF440Q8IYI8 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF440Q8IYI8 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF440Q8IYI8 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ZNF440Q8IYI8 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF440Q8IYI8 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF440Q8IYI8 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF440Q8IYI8 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ZNF440Q8IYI8 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.82■□□□□ 0.28
ZNF440Q8IYI8 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
ZNF440Q8IYI8 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF440Q8IYI8 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF440Q8IYI8 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF440Q8IYI8 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.82■□□□□ 0.28
ZNF440Q8IYI8 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF440Q8IYI8 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
ZNF440Q8IYI8 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ZNF440Q8IYI8 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF440Q8IYI8 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF440Q8IYI8 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF440Q8IYI8 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.82■□□□□ 0.28
ZNF440Q8IYI8 LINC01568-207ENST00000641790 1380 ntBASIC16.82■□□□□ 0.28
ZNF440Q8IYI8 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.82■□□□□ 0.28
ZNF440Q8IYI8 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.82■□□□□ 0.28
ZNF440Q8IYI8 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF440Q8IYI8 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF440Q8IYI8 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF440Q8IYI8 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF440Q8IYI8 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF440Q8IYI8 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF440Q8IYI8 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.82■□□□□ 0.28
ZNF440Q8IYI8 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.82■□□□□ 0.28
ZNF440Q8IYI8 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.82■□□□□ 0.28
ZNF440Q8IYI8 FAM87A-204ENST00000613235 858 ntBASIC16.82■□□□□ 0.28
ZNF440Q8IYI8 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF440Q8IYI8 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.82■□□□□ 0.28
ZNF440Q8IYI8 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF440Q8IYI8 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
ZNF440Q8IYI8 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.82■□□□□ 0.28
ZNF440Q8IYI8 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF440Q8IYI8 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF440Q8IYI8 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.82■□□□□ 0.28
ZNF440Q8IYI8 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.82■□□□□ 0.28
ZNF440Q8IYI8 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF440Q8IYI8 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.81■□□□□ 0.28
ZNF440Q8IYI8 AC135776.1-201ENST00000319817 2481 ntBASIC16.81■□□□□ 0.28
ZNF440Q8IYI8 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms