Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AL359075.1-203ENST00000462729 1002 ntBASIC19.36■□□□□ 0.69
SCUBE3Q8IX30 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SCUBE3Q8IX30 AC034232.1-201ENST00000506026 1064 ntBASIC19.36■□□□□ 0.69
SCUBE3Q8IX30 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.36■□□□□ 0.69
SCUBE3Q8IX30 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCUBE3Q8IX30 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.36■□□□□ 0.69
SCUBE3Q8IX30 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SCUBE3Q8IX30 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
SCUBE3Q8IX30 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SCUBE3Q8IX30 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
SCUBE3Q8IX30 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SCUBE3Q8IX30 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCUBE3Q8IX30 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCUBE3Q8IX30 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.35■□□□□ 0.69
SCUBE3Q8IX30 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCUBE3Q8IX30 AC009102.3-201ENST00000623118 1491 ntBASIC19.35■□□□□ 0.69
SCUBE3Q8IX30 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.35■□□□□ 0.69
SCUBE3Q8IX30 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCUBE3Q8IX30 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCUBE3Q8IX30 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SCUBE3Q8IX30 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCUBE3Q8IX30 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCUBE3Q8IX30 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SCUBE3Q8IX30 MIR149-201ENST00000384879 89 ntBASIC19.35■□□□□ 0.69
SCUBE3Q8IX30 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.35■□□□□ 0.69
SCUBE3Q8IX30 SPDYE15P-201ENST00000424157 909 ntBASIC19.35■□□□□ 0.69
SCUBE3Q8IX30 HOMER2P1-201ENST00000455653 964 ntBASIC19.35■□□□□ 0.69
SCUBE3Q8IX30 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.35■□□□□ 0.69
SCUBE3Q8IX30 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.35■□□□□ 0.69
SCUBE3Q8IX30 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.35■□□□□ 0.69
SCUBE3Q8IX30 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
SCUBE3Q8IX30 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCUBE3Q8IX30 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.35■□□□□ 0.69
SCUBE3Q8IX30 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCUBE3Q8IX30 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SCUBE3Q8IX30 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.35■□□□□ 0.69
SCUBE3Q8IX30 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCUBE3Q8IX30 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCUBE3Q8IX30 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
SCUBE3Q8IX30 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SCUBE3Q8IX30 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.34■□□□□ 0.69
SCUBE3Q8IX30 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCUBE3Q8IX30 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SCUBE3Q8IX30 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.34■□□□□ 0.69
SCUBE3Q8IX30 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCUBE3Q8IX30 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCUBE3Q8IX30 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SCUBE3Q8IX30 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCUBE3Q8IX30 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCUBE3Q8IX30 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.34■□□□□ 0.69
SCUBE3Q8IX30 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCUBE3Q8IX30 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.34■□□□□ 0.69
SCUBE3Q8IX30 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
SCUBE3Q8IX30 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
SCUBE3Q8IX30 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCUBE3Q8IX30 AC092647.4-201ENST00000457211 535 ntBASIC19.34■□□□□ 0.69
SCUBE3Q8IX30 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SCUBE3Q8IX30 AC022616.7-201ENST00000525383 220 ntBASIC19.34■□□□□ 0.69
SCUBE3Q8IX30 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.34■□□□□ 0.69
SCUBE3Q8IX30 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.34■□□□□ 0.69
SCUBE3Q8IX30 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.34■□□□□ 0.69
SCUBE3Q8IX30 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.34■□□□□ 0.69
SCUBE3Q8IX30 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCUBE3Q8IX30 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCUBE3Q8IX30 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCUBE3Q8IX30 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCUBE3Q8IX30 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.34■□□□□ 0.69
SCUBE3Q8IX30 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SCUBE3Q8IX30 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCUBE3Q8IX30 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.34■□□□□ 0.69
SCUBE3Q8IX30 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCUBE3Q8IX30 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCUBE3Q8IX30 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCUBE3Q8IX30 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SCUBE3Q8IX30 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
SCUBE3Q8IX30 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
SCUBE3Q8IX30 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.33■□□□□ 0.69
SCUBE3Q8IX30 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SCUBE3Q8IX30 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SCUBE3Q8IX30 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
SCUBE3Q8IX30 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SCUBE3Q8IX30 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SCUBE3Q8IX30 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SCUBE3Q8IX30 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.69
SCUBE3Q8IX30 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SCUBE3Q8IX30 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.33■□□□□ 0.68
SCUBE3Q8IX30 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.33■□□□□ 0.68
SCUBE3Q8IX30 FAM8A6P-201ENST00000407496 1135 ntBASIC19.33■□□□□ 0.68
SCUBE3Q8IX30 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SCUBE3Q8IX30 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.33■□□□□ 0.68
SCUBE3Q8IX30 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.33■□□□□ 0.68
SCUBE3Q8IX30 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
SCUBE3Q8IX30 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.33■□□□□ 0.68
SCUBE3Q8IX30 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
SCUBE3Q8IX30 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.33■□□□□ 0.68
SCUBE3Q8IX30 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
SCUBE3Q8IX30 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SCUBE3Q8IX30 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SCUBE3Q8IX30 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SCUBE3Q8IX30 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms