Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM50Q86XT4 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM50Q86XT4 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM50Q86XT4 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
TRIM50Q86XT4 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
TRIM50Q86XT4 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM50Q86XT4 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
TRIM50Q86XT4 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM50Q86XT4 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.51■□□□□ 0.87
TRIM50Q86XT4 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.51■□□□□ 0.87
TRIM50Q86XT4 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM50Q86XT4 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM50Q86XT4 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM50Q86XT4 AC009065.1-201ENST00000564055 1225 ntBASIC20.51■□□□□ 0.87
TRIM50Q86XT4 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM50Q86XT4 AC090616.6-201ENST00000582640 721 ntBASIC20.51■□□□□ 0.87
TRIM50Q86XT4 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.51■□□□□ 0.87
TRIM50Q86XT4 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM50Q86XT4 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.51■□□□□ 0.87
TRIM50Q86XT4 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM50Q86XT4 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM50Q86XT4 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM50Q86XT4 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.51■□□□□ 0.87
TRIM50Q86XT4 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM50Q86XT4 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM50Q86XT4 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.5■□□□□ 0.87
TRIM50Q86XT4 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
TRIM50Q86XT4 AC138932.1-201ENST00000534164 6830 ntBASIC20.5■□□□□ 0.87
TRIM50Q86XT4 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM50Q86XT4 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.5■□□□□ 0.87
TRIM50Q86XT4 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM50Q86XT4 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM50Q86XT4 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.5■□□□□ 0.87
TRIM50Q86XT4 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM50Q86XT4 AP000593.1-201ENST00000393668 712 ntBASIC20.5■□□□□ 0.87
TRIM50Q86XT4 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
TRIM50Q86XT4 AL845331.1-201ENST00000424978 1190 ntBASIC20.5■□□□□ 0.87
TRIM50Q86XT4 AC246785.2-201ENST00000432512 513 ntBASIC20.5■□□□□ 0.87
TRIM50Q86XT4 NUS1P1-201ENST00000446295 882 ntBASIC20.5■□□□□ 0.87
TRIM50Q86XT4 FOSL1P1-201ENST00000511041 816 ntBASIC20.5■□□□□ 0.87
TRIM50Q86XT4 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.5■□□□□ 0.87
TRIM50Q86XT4 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.5■□□□□ 0.87
TRIM50Q86XT4 IFNL4P1-201ENST00000607083 540 ntBASIC20.5■□□□□ 0.87
TRIM50Q86XT4 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM50Q86XT4 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM50Q86XT4 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
TRIM50Q86XT4 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.5■□□□□ 0.87
TRIM50Q86XT4 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM50Q86XT4 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
TRIM50Q86XT4 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM50Q86XT4 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM50Q86XT4 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM50Q86XT4 AL353692.3-201ENST00000407031 1396 ntBASIC20.49■□□□□ 0.87
TRIM50Q86XT4 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM50Q86XT4 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.49■□□□□ 0.87
TRIM50Q86XT4 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM50Q86XT4 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.49■□□□□ 0.87
TRIM50Q86XT4 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.49■□□□□ 0.87
TRIM50Q86XT4 AC111152.3-201ENST00000569699 673 ntBASIC20.49■□□□□ 0.87
TRIM50Q86XT4 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.49■□□□□ 0.87
TRIM50Q86XT4 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
TRIM50Q86XT4 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.49■□□□□ 0.87
TRIM50Q86XT4 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM50Q86XT4 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM50Q86XT4 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM50Q86XT4 AC233702.3-201ENST00000578656 1387 ntBASIC20.48■□□□□ 0.87
TRIM50Q86XT4 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM50Q86XT4 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM50Q86XT4 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM50Q86XT4 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM50Q86XT4 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM50Q86XT4 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM50Q86XT4 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM50Q86XT4 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM50Q86XT4 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM50Q86XT4 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
TRIM50Q86XT4 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.48■□□□□ 0.87
TRIM50Q86XT4 AC091607.1-201ENST00000490318 1060 ntBASIC20.48■□□□□ 0.87
TRIM50Q86XT4 AC074051.2-201ENST00000565115 352 ntBASIC20.48■□□□□ 0.87
TRIM50Q86XT4 AC012615.1-201ENST00000565797 1299 ntBASIC20.48■□□□□ 0.87
TRIM50Q86XT4 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.48■□□□□ 0.87
TRIM50Q86XT4 AC138894.3-201ENST00000603787 634 ntBASIC20.48■□□□□ 0.87
TRIM50Q86XT4 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.48■□□□□ 0.87
TRIM50Q86XT4 AC004263.2-201ENST00000617183 678 ntBASIC20.48■□□□□ 0.87
TRIM50Q86XT4 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.48■□□□□ 0.87
TRIM50Q86XT4 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.48■□□□□ 0.87
TRIM50Q86XT4 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.48■□□□□ 0.87
TRIM50Q86XT4 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM50Q86XT4 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.48■□□□□ 0.87
TRIM50Q86XT4 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.48■□□□□ 0.87
TRIM50Q86XT4 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM50Q86XT4 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM50Q86XT4 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM50Q86XT4 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM50Q86XT4 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM50Q86XT4 AC005082.1-201ENST00000413042 2259 ntBASIC20.47■□□□□ 0.87
TRIM50Q86XT4 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.47■□□□□ 0.87
TRIM50Q86XT4 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM50Q86XT4 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.47■□□□□ 0.87
TRIM50Q86XT4 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms