Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.01■□□□□ 0.15
LRRTM1Q86UE6 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRTM1Q86UE6 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
LRRTM1Q86UE6 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRRTM1Q86UE6 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.01■□□□□ 0.15
LRRTM1Q86UE6 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRRTM1Q86UE6 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRTM1Q86UE6 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRTM1Q86UE6 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.01■□□□□ 0.15
LRRTM1Q86UE6 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
LRRTM1Q86UE6 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRRTM1Q86UE6 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.01■□□□□ 0.15
LRRTM1Q86UE6 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.01■□□□□ 0.15
LRRTM1Q86UE6 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRRTM1Q86UE6 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRTM1Q86UE6 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
LRRTM1Q86UE6 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRRTM1Q86UE6 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16■□□□□ 0.15
LRRTM1Q86UE6 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16■□□□□ 0.15
LRRTM1Q86UE6 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16■□□□□ 0.15
LRRTM1Q86UE6 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
LRRTM1Q86UE6 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16■□□□□ 0.15
LRRTM1Q86UE6 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16■□□□□ 0.15
LRRTM1Q86UE6 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16■□□□□ 0.15
LRRTM1Q86UE6 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRRTM1Q86UE6 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRRTM1Q86UE6 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16■□□□□ 0.15
LRRTM1Q86UE6 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
LRRTM1Q86UE6 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRRTM1Q86UE6 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
LRRTM1Q86UE6 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRRTM1Q86UE6 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRRTM1Q86UE6 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
LRRTM1Q86UE6 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRRTM1Q86UE6 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
LRRTM1Q86UE6 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16■□□□□ 0.15
LRRTM1Q86UE6 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC16■□□□□ 0.15
LRRTM1Q86UE6 KRT16P5-201ENST00000455284 522 ntBASIC16■□□□□ 0.15
LRRTM1Q86UE6 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
LRRTM1Q86UE6 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
LRRTM1Q86UE6 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16■□□□□ 0.15
LRRTM1Q86UE6 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRRTM1Q86UE6 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16■□□□□ 0.15
LRRTM1Q86UE6 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16■□□□□ 0.15
LRRTM1Q86UE6 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRRTM1Q86UE6 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16■□□□□ 0.15
LRRTM1Q86UE6 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16■□□□□ 0.15
LRRTM1Q86UE6 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.99■□□□□ 0.15
LRRTM1Q86UE6 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.99■□□□□ 0.15
LRRTM1Q86UE6 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
LRRTM1Q86UE6 AC009053.2-201ENST00000563701 2365 ntBASIC15.99■□□□□ 0.15
LRRTM1Q86UE6 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.99■□□□□ 0.15
LRRTM1Q86UE6 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRRTM1Q86UE6 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRRTM1Q86UE6 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LRRTM1Q86UE6 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRRTM1Q86UE6 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC15.99■□□□□ 0.15
LRRTM1Q86UE6 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LRRTM1Q86UE6 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRRTM1Q86UE6 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.99■□□□□ 0.15
LRRTM1Q86UE6 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRRTM1Q86UE6 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC15.99■□□□□ 0.15
LRRTM1Q86UE6 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.99■□□□□ 0.15
LRRTM1Q86UE6 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRRTM1Q86UE6 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC15.99■□□□□ 0.15
LRRTM1Q86UE6 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
LRRTM1Q86UE6 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LRRTM1Q86UE6 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LRRTM1Q86UE6 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.99■□□□□ 0.15
LRRTM1Q86UE6 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRRTM1Q86UE6 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LRRTM1Q86UE6 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRRTM1Q86UE6 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LRRTM1Q86UE6 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC15.99■□□□□ 0.15
LRRTM1Q86UE6 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC15.99■□□□□ 0.15
LRRTM1Q86UE6 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.99■□□□□ 0.15
LRRTM1Q86UE6 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
LRRTM1Q86UE6 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
LRRTM1Q86UE6 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC15.99■□□□□ 0.15
LRRTM1Q86UE6 AL109659.2-201ENST00000606809 1674 ntBASIC15.99■□□□□ 0.15
LRRTM1Q86UE6 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
LRRTM1Q86UE6 AC099398.1-201ENST00000567919 2776 ntBASIC15.98■□□□□ 0.15
LRRTM1Q86UE6 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LRRTM1Q86UE6 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRRTM1Q86UE6 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.98■□□□□ 0.15
LRRTM1Q86UE6 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRRTM1Q86UE6 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRRTM1Q86UE6 PHGDH-209ENST00000641074 1780 ntBASIC15.98■□□□□ 0.15
LRRTM1Q86UE6 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRRTM1Q86UE6 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LRRTM1Q86UE6 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRRTM1Q86UE6 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRRTM1Q86UE6 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
LRRTM1Q86UE6 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRRTM1Q86UE6 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LRRTM1Q86UE6 SNCG-201ENST00000348795 684 ntTSL 2 BASIC15.98■□□□□ 0.15
LRRTM1Q86UE6 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRRTM1Q86UE6 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRRTM1Q86UE6 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LRRTM1Q86UE6 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms