Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
LDB1Q86U70 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LDB1Q86U70 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.39■□□□□ 0.53
LDB1Q86U70 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.39■□□□□ 0.53
LDB1Q86U70 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
LDB1Q86U70 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
LDB1Q86U70 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.39■□□□□ 0.53
LDB1Q86U70 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
LDB1Q86U70 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.38■□□□□ 0.53
LDB1Q86U70 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.38■□□□□ 0.53
LDB1Q86U70 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
LDB1Q86U70 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LDB1Q86U70 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LDB1Q86U70 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LDB1Q86U70 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LDB1Q86U70 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
LDB1Q86U70 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.38■□□□□ 0.53
LDB1Q86U70 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.38■□□□□ 0.53
LDB1Q86U70 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.38■□□□□ 0.53
LDB1Q86U70 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.38■□□□□ 0.53
LDB1Q86U70 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.38■□□□□ 0.53
LDB1Q86U70 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.38■□□□□ 0.53
LDB1Q86U70 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.38■□□□□ 0.53
LDB1Q86U70 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LDB1Q86U70 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.38■□□□□ 0.53
LDB1Q86U70 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.38■□□□□ 0.53
LDB1Q86U70 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LDB1Q86U70 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LDB1Q86U70 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
LDB1Q86U70 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.38■□□□□ 0.53
LDB1Q86U70 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LDB1Q86U70 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.38■□□□□ 0.53
LDB1Q86U70 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.38■□□□□ 0.53
LDB1Q86U70 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.38■□□□□ 0.53
LDB1Q86U70 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LDB1Q86U70 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.38■□□□□ 0.53
LDB1Q86U70 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.38■□□□□ 0.53
LDB1Q86U70 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
LDB1Q86U70 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LDB1Q86U70 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LDB1Q86U70 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
LDB1Q86U70 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
LDB1Q86U70 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LDB1Q86U70 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.37■□□□□ 0.53
LDB1Q86U70 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.37■□□□□ 0.53
LDB1Q86U70 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
LDB1Q86U70 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
LDB1Q86U70 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LDB1Q86U70 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.37■□□□□ 0.53
LDB1Q86U70 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.37■□□□□ 0.53
LDB1Q86U70 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LDB1Q86U70 AP000593.1-201ENST00000393668 712 ntBASIC18.37■□□□□ 0.53
LDB1Q86U70 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.37■□□□□ 0.53
LDB1Q86U70 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.37■□□□□ 0.53
LDB1Q86U70 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.37■□□□□ 0.53
LDB1Q86U70 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.37■□□□□ 0.53
LDB1Q86U70 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.37■□□□□ 0.53
LDB1Q86U70 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.37■□□□□ 0.53
LDB1Q86U70 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.37■□□□□ 0.53
LDB1Q86U70 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LDB1Q86U70 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LDB1Q86U70 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
LDB1Q86U70 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.37■□□□□ 0.53
LDB1Q86U70 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.37■□□□□ 0.53
LDB1Q86U70 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
LDB1Q86U70 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.37■□□□□ 0.53
LDB1Q86U70 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
LDB1Q86U70 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LDB1Q86U70 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
LDB1Q86U70 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.36■□□□□ 0.53
LDB1Q86U70 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
LDB1Q86U70 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
LDB1Q86U70 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LDB1Q86U70 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LDB1Q86U70 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
LDB1Q86U70 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LDB1Q86U70 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LDB1Q86U70 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LDB1Q86U70 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
LDB1Q86U70 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LDB1Q86U70 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LDB1Q86U70 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LDB1Q86U70 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LDB1Q86U70 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LDB1Q86U70 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
LDB1Q86U70 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LDB1Q86U70 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.36■□□□□ 0.53
LDB1Q86U70 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LDB1Q86U70 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LDB1Q86U70 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.36■□□□□ 0.53
LDB1Q86U70 AC009947.2-201ENST00000444014 672 ntBASIC18.36■□□□□ 0.53
LDB1Q86U70 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.36■□□□□ 0.53
LDB1Q86U70 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LDB1Q86U70 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.36■□□□□ 0.53
LDB1Q86U70 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.36■□□□□ 0.53
LDB1Q86U70 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LDB1Q86U70 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.36■□□□□ 0.53
LDB1Q86U70 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LDB1Q86U70 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
LDB1Q86U70 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms