Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.5■□□□□ 0.55
LYSMD3Q7Z3D4 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.5■□□□□ 0.55
LYSMD3Q7Z3D4 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LYSMD3Q7Z3D4 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.5■□□□□ 0.55
LYSMD3Q7Z3D4 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
LYSMD3Q7Z3D4 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.5■□□□□ 0.55
LYSMD3Q7Z3D4 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LYSMD3Q7Z3D4 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.5■□□□□ 0.55
LYSMD3Q7Z3D4 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
LYSMD3Q7Z3D4 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LYSMD3Q7Z3D4 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LYSMD3Q7Z3D4 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LYSMD3Q7Z3D4 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
LYSMD3Q7Z3D4 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LYSMD3Q7Z3D4 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
LYSMD3Q7Z3D4 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LYSMD3Q7Z3D4 AL163051.1-201ENST00000569214 1512 ntBASIC18.49■□□□□ 0.55
LYSMD3Q7Z3D4 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LYSMD3Q7Z3D4 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
LYSMD3Q7Z3D4 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LYSMD3Q7Z3D4 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LYSMD3Q7Z3D4 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.49■□□□□ 0.55
LYSMD3Q7Z3D4 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LYSMD3Q7Z3D4 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LYSMD3Q7Z3D4 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
LYSMD3Q7Z3D4 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.49■□□□□ 0.55
LYSMD3Q7Z3D4 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LYSMD3Q7Z3D4 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
LYSMD3Q7Z3D4 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.49■□□□□ 0.55
LYSMD3Q7Z3D4 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.49■□□□□ 0.55
LYSMD3Q7Z3D4 AL157888.1-201ENST00000631930 593 ntBASIC18.49■□□□□ 0.55
LYSMD3Q7Z3D4 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LYSMD3Q7Z3D4 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LYSMD3Q7Z3D4 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
LYSMD3Q7Z3D4 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LYSMD3Q7Z3D4 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LYSMD3Q7Z3D4 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
LYSMD3Q7Z3D4 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LYSMD3Q7Z3D4 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LYSMD3Q7Z3D4 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.49■□□□□ 0.55
LYSMD3Q7Z3D4 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.49■□□□□ 0.55
LYSMD3Q7Z3D4 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
LYSMD3Q7Z3D4 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LYSMD3Q7Z3D4 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LYSMD3Q7Z3D4 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.49■□□□□ 0.55
LYSMD3Q7Z3D4 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LYSMD3Q7Z3D4 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.48■□□□□ 0.55
LYSMD3Q7Z3D4 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LYSMD3Q7Z3D4 AC104581.1-202ENST00000635932 2618 ntBASIC18.48■□□□□ 0.55
LYSMD3Q7Z3D4 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LYSMD3Q7Z3D4 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LYSMD3Q7Z3D4 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LYSMD3Q7Z3D4 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
LYSMD3Q7Z3D4 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LYSMD3Q7Z3D4 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.48■□□□□ 0.55
LYSMD3Q7Z3D4 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.48■□□□□ 0.55
LYSMD3Q7Z3D4 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LYSMD3Q7Z3D4 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.48■□□□□ 0.55
LYSMD3Q7Z3D4 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.48■□□□□ 0.55
LYSMD3Q7Z3D4 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.48■□□□□ 0.55
LYSMD3Q7Z3D4 MIR3917-201ENST00000580971 93 ntBASIC18.48■□□□□ 0.55
LYSMD3Q7Z3D4 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.48■□□□□ 0.55
LYSMD3Q7Z3D4 AL445228.2-201ENST00000605589 952 ntBASIC18.48■□□□□ 0.55
LYSMD3Q7Z3D4 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LYSMD3Q7Z3D4 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LYSMD3Q7Z3D4 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
LYSMD3Q7Z3D4 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.48■□□□□ 0.55
LYSMD3Q7Z3D4 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
LYSMD3Q7Z3D4 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LYSMD3Q7Z3D4 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LYSMD3Q7Z3D4 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LYSMD3Q7Z3D4 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LYSMD3Q7Z3D4 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LYSMD3Q7Z3D4 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LYSMD3Q7Z3D4 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
LYSMD3Q7Z3D4 AC073592.3-201ENST00000625118 1834 ntBASIC18.47■□□□□ 0.55
LYSMD3Q7Z3D4 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LYSMD3Q7Z3D4 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
LYSMD3Q7Z3D4 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LYSMD3Q7Z3D4 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LYSMD3Q7Z3D4 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
LYSMD3Q7Z3D4 SPDYE15P-201ENST00000424157 909 ntBASIC18.47■□□□□ 0.55
LYSMD3Q7Z3D4 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
LYSMD3Q7Z3D4 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.47■□□□□ 0.55
LYSMD3Q7Z3D4 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LYSMD3Q7Z3D4 AL359075.1-203ENST00000462729 1002 ntBASIC18.47■□□□□ 0.55
LYSMD3Q7Z3D4 AC063952.2-201ENST00000498792 1227 ntBASIC18.47■□□□□ 0.55
LYSMD3Q7Z3D4 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
LYSMD3Q7Z3D4 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.47■□□□□ 0.55
LYSMD3Q7Z3D4 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.47■□□□□ 0.55
LYSMD3Q7Z3D4 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
LYSMD3Q7Z3D4 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LYSMD3Q7Z3D4 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.47■□□□□ 0.55
LYSMD3Q7Z3D4 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
LYSMD3Q7Z3D4 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LYSMD3Q7Z3D4 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
LYSMD3Q7Z3D4 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.47■□□□□ 0.55
LYSMD3Q7Z3D4 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.47■□□□□ 0.55
LYSMD3Q7Z3D4 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LYSMD3Q7Z3D4 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms