Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.31
COPS6Q7L5N1 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.31
COPS6Q7L5N1 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
COPS6Q7L5N1 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
COPS6Q7L5N1 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC23.2■■□□□ 1.3
COPS6Q7L5N1 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC23.2■■□□□ 1.3
COPS6Q7L5N1 ANO7L1-203ENST00000602586 1720 ntBASIC23.2■■□□□ 1.3
COPS6Q7L5N1 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
COPS6Q7L5N1 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
COPS6Q7L5N1 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
COPS6Q7L5N1 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
COPS6Q7L5N1 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
COPS6Q7L5N1 AC004870.1-201ENST00000315132 882 ntBASIC23.2■■□□□ 1.3
COPS6Q7L5N1 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC23.2■■□□□ 1.3
COPS6Q7L5N1 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
COPS6Q7L5N1 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
COPS6Q7L5N1 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
COPS6Q7L5N1 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
COPS6Q7L5N1 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC23.19■■□□□ 1.3
COPS6Q7L5N1 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC23.19■■□□□ 1.3
COPS6Q7L5N1 LINC01126-201ENST00000623515 1646 ntBASIC23.19■■□□□ 1.3
COPS6Q7L5N1 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
COPS6Q7L5N1 NSUN5P1-202ENST00000421140 1535 ntBASIC23.19■■□□□ 1.3
COPS6Q7L5N1 NSUN5P2-203ENST00000457352 1529 ntBASIC23.19■■□□□ 1.3
COPS6Q7L5N1 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
COPS6Q7L5N1 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
COPS6Q7L5N1 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC23.19■■□□□ 1.3
COPS6Q7L5N1 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC23.19■■□□□ 1.3
COPS6Q7L5N1 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
COPS6Q7L5N1 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
COPS6Q7L5N1 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
COPS6Q7L5N1 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
COPS6Q7L5N1 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC23.19■■□□□ 1.3
COPS6Q7L5N1 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
COPS6Q7L5N1 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC23.19■■□□□ 1.3
COPS6Q7L5N1 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
COPS6Q7L5N1 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC23.19■■□□□ 1.3
COPS6Q7L5N1 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
COPS6Q7L5N1 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COPS6Q7L5N1 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
COPS6Q7L5N1 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC23.18■■□□□ 1.3
COPS6Q7L5N1 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC23.18■■□□□ 1.3
COPS6Q7L5N1 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
COPS6Q7L5N1 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC23.18■■□□□ 1.3
COPS6Q7L5N1 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
COPS6Q7L5N1 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC23.18■■□□□ 1.3
COPS6Q7L5N1 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COPS6Q7L5N1 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC23.18■■□□□ 1.3
COPS6Q7L5N1 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
COPS6Q7L5N1 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
COPS6Q7L5N1 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
COPS6Q7L5N1 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC23.18■■□□□ 1.3
COPS6Q7L5N1 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC23.18■■□□□ 1.3
COPS6Q7L5N1 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC23.18■■□□□ 1.3
COPS6Q7L5N1 AC011840.4-201ENST00000578471 627 ntBASIC23.18■■□□□ 1.3
COPS6Q7L5N1 AL353801.3-201ENST00000609898 542 ntBASIC23.18■■□□□ 1.3
COPS6Q7L5N1 GXYLT1P4-201ENST00000613576 1192 ntBASIC23.18■■□□□ 1.3
COPS6Q7L5N1 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC23.18■■□□□ 1.3
COPS6Q7L5N1 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
COPS6Q7L5N1 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC23.18■■□□□ 1.3
COPS6Q7L5N1 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
COPS6Q7L5N1 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COPS6Q7L5N1 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
COPS6Q7L5N1 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COPS6Q7L5N1 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC23.17■■□□□ 1.3
COPS6Q7L5N1 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COPS6Q7L5N1 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COPS6Q7L5N1 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
COPS6Q7L5N1 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
COPS6Q7L5N1 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COPS6Q7L5N1 ABR-204ENST00000543210 1049 ntTSL 2 BASIC23.17■■□□□ 1.3
COPS6Q7L5N1 ABR-217ENST00000572441 563 ntTSL 4 BASIC23.17■■□□□ 1.3
COPS6Q7L5N1 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COPS6Q7L5N1 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
COPS6Q7L5N1 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC23.17■■□□□ 1.3
COPS6Q7L5N1 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
COPS6Q7L5N1 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
COPS6Q7L5N1 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC23.16■■□□□ 1.3
COPS6Q7L5N1 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
COPS6Q7L5N1 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
COPS6Q7L5N1 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
COPS6Q7L5N1 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
COPS6Q7L5N1 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
COPS6Q7L5N1 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
COPS6Q7L5N1 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC23.16■■□□□ 1.3
COPS6Q7L5N1 CDV3-207ENST00000508481 661 ntTSL 3 BASIC23.16■■□□□ 1.3
COPS6Q7L5N1 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC23.16■■□□□ 1.3
COPS6Q7L5N1 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC23.16■■□□□ 1.3
COPS6Q7L5N1 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
COPS6Q7L5N1 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
COPS6Q7L5N1 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
COPS6Q7L5N1 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
COPS6Q7L5N1 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
COPS6Q7L5N1 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
COPS6Q7L5N1 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
COPS6Q7L5N1 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
COPS6Q7L5N1 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
COPS6Q7L5N1 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
COPS6Q7L5N1 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
COPS6Q7L5N1 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms