Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
TUBA1AQ71U36 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TUBA1AQ71U36 MIR718-201ENST00000390190 70 ntBASIC17.01■□□□□ 0.31
TUBA1AQ71U36 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.01■□□□□ 0.31
TUBA1AQ71U36 FAM197Y1-201ENST00000421178 764 ntBASIC17.01■□□□□ 0.31
TUBA1AQ71U36 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.01■□□□□ 0.31
TUBA1AQ71U36 TSPY7P-201ENST00000431358 1114 ntBASIC17.01■□□□□ 0.31
TUBA1AQ71U36 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TUBA1AQ71U36 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.01■□□□□ 0.31
TUBA1AQ71U36 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.01■□□□□ 0.31
TUBA1AQ71U36 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TUBA1AQ71U36 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TUBA1AQ71U36 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.01■□□□□ 0.31
TUBA1AQ71U36 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TUBA1AQ71U36 AC233702.5-201ENST00000584107 538 ntBASIC17.01■□□□□ 0.31
TUBA1AQ71U36 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.01■□□□□ 0.31
TUBA1AQ71U36 AC113410.3-201ENST00000623366 203 ntBASIC17.01■□□□□ 0.31
TUBA1AQ71U36 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TUBA1AQ71U36 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TUBA1AQ71U36 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.01■□□□□ 0.31
TUBA1AQ71U36 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TUBA1AQ71U36 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.01■□□□□ 0.31
TUBA1AQ71U36 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TUBA1AQ71U36 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.01■□□□□ 0.31
TUBA1AQ71U36 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TUBA1AQ71U36 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TUBA1AQ71U36 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TUBA1AQ71U36 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.01■□□□□ 0.31
TUBA1AQ71U36 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.01■□□□□ 0.31
TUBA1AQ71U36 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
TUBA1AQ71U36 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TUBA1AQ71U36 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TUBA1AQ71U36 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17■□□□□ 0.31
TUBA1AQ71U36 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TUBA1AQ71U36 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
TUBA1AQ71U36 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TUBA1AQ71U36 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TUBA1AQ71U36 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TUBA1AQ71U36 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17■□□□□ 0.31
TUBA1AQ71U36 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
TUBA1AQ71U36 AL596275.1-201ENST00000423464 877 ntBASIC17■□□□□ 0.31
TUBA1AQ71U36 AC012618.2-201ENST00000428058 849 ntBASIC17■□□□□ 0.31
TUBA1AQ71U36 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17■□□□□ 0.31
TUBA1AQ71U36 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17■□□□□ 0.31
TUBA1AQ71U36 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17■□□□□ 0.31
TUBA1AQ71U36 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17■□□□□ 0.31
TUBA1AQ71U36 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17■□□□□ 0.31
TUBA1AQ71U36 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17■□□□□ 0.31
TUBA1AQ71U36 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17■□□□□ 0.31
TUBA1AQ71U36 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17■□□□□ 0.31
TUBA1AQ71U36 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17■□□□□ 0.31
TUBA1AQ71U36 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17■□□□□ 0.31
TUBA1AQ71U36 CR392000.1-201ENST00000624770 1228 ntBASIC17■□□□□ 0.31
TUBA1AQ71U36 AL049637.2-201ENST00000641778 930 ntBASIC17■□□□□ 0.31
TUBA1AQ71U36 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TUBA1AQ71U36 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17■□□□□ 0.31
TUBA1AQ71U36 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17■□□□□ 0.31
TUBA1AQ71U36 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TUBA1AQ71U36 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TUBA1AQ71U36 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
TUBA1AQ71U36 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TUBA1AQ71U36 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17■□□□□ 0.31
TUBA1AQ71U36 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TUBA1AQ71U36 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TUBA1AQ71U36 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TUBA1AQ71U36 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17■□□□□ 0.31
TUBA1AQ71U36 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TUBA1AQ71U36 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TUBA1AQ71U36 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TUBA1AQ71U36 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TUBA1AQ71U36 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17■□□□□ 0.31
TUBA1AQ71U36 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TUBA1AQ71U36 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TUBA1AQ71U36 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TUBA1AQ71U36 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.99■□□□□ 0.31
TUBA1AQ71U36 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.99■□□□□ 0.31
TUBA1AQ71U36 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TUBA1AQ71U36 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.99■□□□□ 0.31
TUBA1AQ71U36 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TUBA1AQ71U36 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TUBA1AQ71U36 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TUBA1AQ71U36 AL135905.2-201ENST00000584934 1404 ntBASIC16.99■□□□□ 0.31
TUBA1AQ71U36 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.99■□□□□ 0.31
TUBA1AQ71U36 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TUBA1AQ71U36 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TUBA1AQ71U36 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TUBA1AQ71U36 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TUBA1AQ71U36 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TUBA1AQ71U36 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
TUBA1AQ71U36 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
TUBA1AQ71U36 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
TUBA1AQ71U36 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
TUBA1AQ71U36 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.99■□□□□ 0.31
TUBA1AQ71U36 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TUBA1AQ71U36 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TUBA1AQ71U36 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TUBA1AQ71U36 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TUBA1AQ71U36 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TUBA1AQ71U36 AC012317.2-201ENST00000623305 2251 ntBASIC16.99■□□□□ 0.31
TUBA1AQ71U36 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms