Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.54■□□□□ 0.24
NHLRC1Q6VVB1 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NHLRC1Q6VVB1 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.54■□□□□ 0.24
NHLRC1Q6VVB1 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NHLRC1Q6VVB1 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NHLRC1Q6VVB1 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NHLRC1Q6VVB1 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NHLRC1Q6VVB1 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.54■□□□□ 0.24
NHLRC1Q6VVB1 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NHLRC1Q6VVB1 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.54■□□□□ 0.24
NHLRC1Q6VVB1 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NHLRC1Q6VVB1 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.54■□□□□ 0.24
NHLRC1Q6VVB1 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NHLRC1Q6VVB1 AC012313.1-201ENST00000593393 3059 ntBASIC16.54■□□□□ 0.24
NHLRC1Q6VVB1 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.54■□□□□ 0.24
NHLRC1Q6VVB1 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NHLRC1Q6VVB1 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NHLRC1Q6VVB1 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.54■□□□□ 0.24
NHLRC1Q6VVB1 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NHLRC1Q6VVB1 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.54■□□□□ 0.24
NHLRC1Q6VVB1 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NHLRC1Q6VVB1 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
NHLRC1Q6VVB1 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
NHLRC1Q6VVB1 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.54■□□□□ 0.24
NHLRC1Q6VVB1 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.54■□□□□ 0.24
NHLRC1Q6VVB1 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NHLRC1Q6VVB1 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
NHLRC1Q6VVB1 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NHLRC1Q6VVB1 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
NHLRC1Q6VVB1 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.53■□□□□ 0.24
NHLRC1Q6VVB1 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NHLRC1Q6VVB1 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NHLRC1Q6VVB1 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.53■□□□□ 0.24
NHLRC1Q6VVB1 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.53■□□□□ 0.24
NHLRC1Q6VVB1 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NHLRC1Q6VVB1 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NHLRC1Q6VVB1 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NHLRC1Q6VVB1 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NHLRC1Q6VVB1 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.53■□□□□ 0.24
NHLRC1Q6VVB1 AP000593.1-201ENST00000393668 712 ntBASIC16.53■□□□□ 0.24
NHLRC1Q6VVB1 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NHLRC1Q6VVB1 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.53■□□□□ 0.24
NHLRC1Q6VVB1 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.53■□□□□ 0.24
NHLRC1Q6VVB1 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.53■□□□□ 0.24
NHLRC1Q6VVB1 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.53■□□□□ 0.24
NHLRC1Q6VVB1 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.53■□□□□ 0.24
NHLRC1Q6VVB1 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
NHLRC1Q6VVB1 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.53■□□□□ 0.24
NHLRC1Q6VVB1 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.53■□□□□ 0.24
NHLRC1Q6VVB1 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.53■□□□□ 0.24
NHLRC1Q6VVB1 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NHLRC1Q6VVB1 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
NHLRC1Q6VVB1 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NHLRC1Q6VVB1 AC068880.1-201ENST00000507289 2297 ntBASIC16.53■□□□□ 0.24
NHLRC1Q6VVB1 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NHLRC1Q6VVB1 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NHLRC1Q6VVB1 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NHLRC1Q6VVB1 AC106820.2-201ENST00000563775 3264 ntBASIC16.53■□□□□ 0.24
NHLRC1Q6VVB1 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NHLRC1Q6VVB1 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NHLRC1Q6VVB1 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
NHLRC1Q6VVB1 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NHLRC1Q6VVB1 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
NHLRC1Q6VVB1 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NHLRC1Q6VVB1 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NHLRC1Q6VVB1 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NHLRC1Q6VVB1 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NHLRC1Q6VVB1 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
NHLRC1Q6VVB1 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NHLRC1Q6VVB1 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
NHLRC1Q6VVB1 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.52■□□□□ 0.24
NHLRC1Q6VVB1 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NHLRC1Q6VVB1 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NHLRC1Q6VVB1 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
NHLRC1Q6VVB1 AC128688.1-201ENST00000487626 519 ntBASIC16.52■□□□□ 0.24
NHLRC1Q6VVB1 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.52■□□□□ 0.24
NHLRC1Q6VVB1 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.52■□□□□ 0.24
NHLRC1Q6VVB1 AC145285.6-201ENST00000604632 637 ntBASIC16.52■□□□□ 0.24
NHLRC1Q6VVB1 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
NHLRC1Q6VVB1 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
NHLRC1Q6VVB1 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NHLRC1Q6VVB1 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
NHLRC1Q6VVB1 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NHLRC1Q6VVB1 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
NHLRC1Q6VVB1 KRT8P7-201ENST00000533003 1432 ntBASIC16.52■□□□□ 0.23
NHLRC1Q6VVB1 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
NHLRC1Q6VVB1 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NHLRC1Q6VVB1 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NHLRC1Q6VVB1 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.52■□□□□ 0.23
NHLRC1Q6VVB1 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
NHLRC1Q6VVB1 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
NHLRC1Q6VVB1 LINC01568-207ENST00000641790 1380 ntBASIC16.51■□□□□ 0.23
NHLRC1Q6VVB1 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.51■□□□□ 0.23
NHLRC1Q6VVB1 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
NHLRC1Q6VVB1 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NHLRC1Q6VVB1 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NHLRC1Q6VVB1 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NHLRC1Q6VVB1 NOC2LP2-201ENST00000407594 1944 ntBASIC16.51■□□□□ 0.23
NHLRC1Q6VVB1 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.51■□□□□ 0.23
NHLRC1Q6VVB1 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms