Protein–RNA interactions for Protein: Q6TDU7

CASC1, Protein CASC1, humanhuman

Predictions only

Length 716 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1Q6TDU7 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CASC1Q6TDU7 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CASC1Q6TDU7 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
CASC1Q6TDU7 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CASC1Q6TDU7 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
CASC1Q6TDU7 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
CASC1Q6TDU7 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
CASC1Q6TDU7 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CASC1Q6TDU7 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
CASC1Q6TDU7 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
CASC1Q6TDU7 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CASC1Q6TDU7 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC22.54■■□□□ 1.2
CASC1Q6TDU7 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC22.54■■□□□ 1.2
CASC1Q6TDU7 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC22.54■■□□□ 1.2
CASC1Q6TDU7 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC22.54■■□□□ 1.2
CASC1Q6TDU7 AC026471.5-201ENST00000615068 467 ntBASIC22.54■■□□□ 1.2
CASC1Q6TDU7 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CASC1Q6TDU7 NOC2LP2-201ENST00000407594 1944 ntBASIC22.54■■□□□ 1.2
CASC1Q6TDU7 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC22.54■■□□□ 1.2
CASC1Q6TDU7 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC22.54■■□□□ 1.2
CASC1Q6TDU7 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CASC1Q6TDU7 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC22.53■■□□□ 1.2
CASC1Q6TDU7 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
CASC1Q6TDU7 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC22.53■■□□□ 1.2
CASC1Q6TDU7 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
CASC1Q6TDU7 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CASC1Q6TDU7 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CASC1Q6TDU7 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC22.53■■□□□ 1.2
CASC1Q6TDU7 CRYGFP-201ENST00000418459 633 ntBASIC22.53■■□□□ 1.2
CASC1Q6TDU7 TSPY7P-201ENST00000431358 1114 ntBASIC22.53■■□□□ 1.2
CASC1Q6TDU7 ELP6-205ENST00000439305 880 ntTSL 2 BASIC22.53■■□□□ 1.2
CASC1Q6TDU7 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC22.53■■□□□ 1.2
CASC1Q6TDU7 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC22.53■■□□□ 1.2
CASC1Q6TDU7 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CASC1Q6TDU7 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC22.53■■□□□ 1.2
CASC1Q6TDU7 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CASC1Q6TDU7 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
CASC1Q6TDU7 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CASC1Q6TDU7 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
CASC1Q6TDU7 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC22.52■■□□□ 1.2
CASC1Q6TDU7 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
CASC1Q6TDU7 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CASC1Q6TDU7 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CASC1Q6TDU7 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CASC1Q6TDU7 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CASC1Q6TDU7 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CASC1Q6TDU7 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC22.52■■□□□ 1.2
CASC1Q6TDU7 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
CASC1Q6TDU7 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
CASC1Q6TDU7 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CASC1Q6TDU7 SNORA78-201ENST00000459373 127 ntBASIC22.52■■□□□ 1.2
CASC1Q6TDU7 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC22.52■■□□□ 1.2
CASC1Q6TDU7 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC22.52■■□□□ 1.2
CASC1Q6TDU7 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC22.52■■□□□ 1.2
CASC1Q6TDU7 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC22.52■■□□□ 1.2
CASC1Q6TDU7 REXO1L10P-201ENST00000615707 1290 ntBASIC22.52■■□□□ 1.2
CASC1Q6TDU7 REXO1L12P-201ENST00000622156 912 ntBASIC22.52■■□□□ 1.2
CASC1Q6TDU7 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC22.52■■□□□ 1.2
CASC1Q6TDU7 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC22.52■■□□□ 1.2
CASC1Q6TDU7 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CASC1Q6TDU7 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CASC1Q6TDU7 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CASC1Q6TDU7 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC22.52■■□□□ 1.2
CASC1Q6TDU7 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.19
CASC1Q6TDU7 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
CASC1Q6TDU7 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.19
CASC1Q6TDU7 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
CASC1Q6TDU7 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC22.51■■□□□ 1.19
CASC1Q6TDU7 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC22.51■■□□□ 1.19
CASC1Q6TDU7 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC22.51■■□□□ 1.19
CASC1Q6TDU7 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CASC1Q6TDU7 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CASC1Q6TDU7 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
CASC1Q6TDU7 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CASC1Q6TDU7 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC22.51■■□□□ 1.19
CASC1Q6TDU7 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CASC1Q6TDU7 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
CASC1Q6TDU7 FDX2-206ENST00000492239 773 ntTSL 2 BASIC22.51■■□□□ 1.19
CASC1Q6TDU7 AC093827.2-201ENST00000512654 315 ntBASIC22.51■■□□□ 1.19
CASC1Q6TDU7 AC066615.1-201ENST00000640911 628 ntBASIC22.51■■□□□ 1.19
CASC1Q6TDU7 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
CASC1Q6TDU7 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC22.51■■□□□ 1.19
CASC1Q6TDU7 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC22.51■■□□□ 1.19
CASC1Q6TDU7 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CASC1Q6TDU7 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
CASC1Q6TDU7 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC22.51■■□□□ 1.19
CASC1Q6TDU7 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CASC1Q6TDU7 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CASC1Q6TDU7 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CASC1Q6TDU7 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
CASC1Q6TDU7 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
CASC1Q6TDU7 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC22.5■■□□□ 1.19
CASC1Q6TDU7 AC093677.2-201ENST00000600169 1863 ntBASIC22.5■■□□□ 1.19
CASC1Q6TDU7 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CASC1Q6TDU7 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
CASC1Q6TDU7 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
CASC1Q6TDU7 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC22.5■■□□□ 1.19
CASC1Q6TDU7 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC22.5■■□□□ 1.19
CASC1Q6TDU7 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC22.5■■□□□ 1.19
CASC1Q6TDU7 MIR3180-5-201ENST00000583743 153 ntBASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms